Master control genes in development and evolution

P. Baumgartner, M. Berry, J. Blanco, L. Edelmann, D. Felix, J. Espinoza, S. Flister, S. Glardon, U. Kloter, H. Janssens, J. Jäger, T. Kunieda, L. Michaut, M. Plaza, F. Prince, C. Punzo, D. Resendez-Perez, M. Seimiya, S. Schonegg
Visiting scientist: A. Percival-Smith (University of Western Ontario, Canada), C.W. Bazinet (St. Johan's University, Jamaica)
In collaboration with S. Artavanis-Tsakonas (New Haven), J. Bi&ecute;rne (Reims), M. Busslinger (Wien), N. Holland (La Jolla), K. Ikeo (Mishima), H. Reichert (Basel), V. Schmid (Basel), U. Walldorf (Stuttgart)

W.J. Gehring
Phone: +41 61 267 2051 Fax: +41 61 267 2078 E-mail: walter.gehring@unibas.ch

My book "Master Control Genes in Developmentand Evolution: The Homeobox Story", that was published in 1998, summarizes our work on homeotic genes over the last thirty years. There are still many open questions, but in the past two years, my research group has solved a few more pieces of the puzzle.

We have pursued the question of how the two homeotic genes Antennapedia (Antp) and Sex combs reduced (Scr) which have very similar homeoboxes are differentially regulated. Earlier work had narrowed down the differences between the two proteins to four amino acid residues in the flexible N-terminal arm of the homeodomain. Two of these amino acids are threonine 6, that is conserved from flies to humans, and serine 7, which in vertebrates is replaced by alanine. The regulatory subunit of the serine-threonine protein phosphatase PP2a of Drosophila binds to the homeodomain of SCR, but not to thatof ANTP, raising the possibility that SCR is regulated by a phosphorylation - dephosphorylation mechanism. The mutant protein in which threonine and serine are replaced by two alanines remains active in transgenic flies, where as the substitution by two aspartate residues (ressembling the phosphorylated form) inactivates SCR. This implies that the dephosphorylated form of the protein is active. RNA interference experiments by injection of double stranded RNA of the protein phosphatase subunit gives an Scr mutant phenotype, thus confirming the in vivo regulation of Scr by the protein phosphatase.

The Notch signaling pathway defines an evolutionary conserved cell-cell interaction mechanism which throughout development controls the ability of precursor cells to respond to developmental signals. Notch is also involvedin a common regulatory pathway for the determination of the various Drosophila appendages, if activated at anearly time point in the developmental pathway. By ectopic expression of a constitutively activated form of the Notch receptor, Notch signaling initiates the expression of the master control genes eyeless, vestigial, Distal-less and homothorax, which in combination with homeotic genes induce the formation of ectopic eyes, wings, legs and antennae. The regulatory mechanism for these spectacular effects is under investigation.

In an attempt to reconstruct the evolutionary history of the homeobox genes, we have isolated and characterized the Hox genes of the ribbonworm (Lineus sanguineus).The bodyplan of the ribbonworms (nemertini) seems to be close to the common ancestral condition found in protostomes and deuterostomes. We found that the Lineus genome contains a compact Hox cluster of at least 6 genes. Each of these genes can be definitely assigned to an ortholog group on the basis of its homeobox and its flanking sequences. The most closely related homeodomain sequences are invariably found among the mouse and Amphioxus orthologs, rather than Drosophila and other invertebrates. This suggests that the ribbonworms may have diverged relatively little from the last common ancestors of proto- and deuterostomes, the urbilateria.

Lineus also has a remarkable potential for regeneration. We have artificially generated "homeotic" ribbonworms with a duplicated ocellar region, replacing the postocellar region anterior to the brain. Such chimaeras are capable of morphogenetic regulation to restore the normal antero-posterior pattern. The missing postocellar region is restored by intercalary regeneration and the anterior duplicated ocellar region is eliminated by a process called transgeneration. This reverse homeosis involves the removal of the syngeneic eyes and the retention of the grafted allogeneic eyes. The mechanism of this reverse homeosis remains to be elucidated, but homeobox genes are likely to be involved.

Morphogenesis and evolution of the eyes

Our work on Pax6 as a master control gene for eyemorphogenesis and the implications for eye evolution have been summarized for Trends in Genetics (Gehring & Ikeo, 1999). Pax genes from various animal phyla are capable of inducing ectopic eye morphogenesis, indicating that Pax6 is a master control gene for eye development. It is proposed that contrary to the dogma, the various eye-types found in metazoa, are derived monophyletically, from a common prototype. In order to explain the evolution of the different types of eyes, we have advanced the hypothesis that different genes are intercalated into the prototypic eye developmental pathway in the various animal phyla.

In Drosophila we have documented two cases of gene intercalation (recruitment) into the eye developmental pathway: twin of eyeless and drosocrystallin. The Drosophila genome contains in addition to eyeless (ey) asecond Pax6 homolog, called twin of eyeless (toy). This pair of genes has presumably arisen by gene duplication relatively late during insect evolution. toy and ey share a similar pattern of expression, but toy is expressed much earlier during embryogenesis. Targeted expression of toy, like ey, induces the formation of ectopic eyes. Genetic and biochemical evidence indicates, however, that toy functions upstream of ey by directly regulating the eye-specific enhancer of ey.

Toy is therefore required forinitiation of ey expression in the embryo and acts through ey to induce the eye developmental program.

A second gene which appears to have been recruited into the eye developmental pathway is the major lens protein gene encoding drosocrystallin. The cloning and sequencing of this gene clearly indicates that this gene originally encoded a cuticle protein, that subsequently was used as a lens protein.

To infer the evolutionary history of Pax6 we have also cloned the orthologs from Amphioxus and from the planarian Dugesia tigrina. The Amphioxus Pax6 gene is expressed in the olfactory epithelium, the lamellar body (a presumed homolog of the vertebrate pineal eye) and the precursor cells of the frontal eye. The Dugesia Pax6 gene is expressed in the eyes, both in the photoreceptors and the pigment cells, strengthening the correlation between Pax6 and eye morphogenesis.



Eggert, T., Hauck, B., Hildebrandt, N., Gehring, W.J., and Walldorf, U.: Isolation of a Drosophila homolog of the vertebrate homeobox gene Rx and its possible role in brain and eye development. Proc. Natl. Acad. Sci. USA 95, 2343-2348 (1998).

Kmita-Cunisse, M., Loosli, F., Bi rne, J., and Gehring, W.J.: Homeobox genes in the ribbonworm Lineus sanguineus: Evolutionary implications. Proc. Natl. Acad.Sci. USA 95, 3030-3035 (1998).

Girard, F., Bello, B., Laemmli, U.K., and Gehring, W.J.: In vivo analysis of Scaffold-associated regions in Drosophila: a synthetic high-affinity SAR binding protein suppresses position effect variegation. EMBO J. 17, 2079-2085 (1998).

Halder, G., Callaerts, P., Flister, S., Walldorf, U., Kloter, U., and Gehring, W.J.: Eyeless initiates the expression of both sine oculis and eyes absent during Drosophila compound eye development. Development 125, 2181-2191 (1998).

Bello, B., Resendez-Perez, D., and Gehring, W.J.: Spatial and temporal targeting of gene expression in Drosophila by means of a tetracycline-dependent transactivator system. Development 125, 2193-2202 (1998).

Glardon, S., Holland, L.Z., Gehring, W.J., and Holland. N.D.: Isolation and developmental expression of the amphioxus Pax-6 gene (AmphiPax-6): insights into eye and photoreceptor evolution. Development 125, 2701-2710 (1998).

Leuzinger, S. Hirth, F., Gerlich, D., Acampora, D., Simeone, A., Gehring, W.J., Finkelstein, R., Furukubo-Tokunaga, K., and Reichert, H.: Equivalence of the fly orthodenticle gene and the human OTX genes in embryonic brain development of Drosophila. Development 125, 1703-1710 (1998).

Gehring, W.J.: Master Control Genes in Development and Evolution: The Homeobox Story. Yale University Press New Haven, USA, 1998.

Callerts, P., Munoz-Marmol, A.M., Glardon, S., Castillo, E., Sun, H., Li, W.-H., Gehring, W.J., and Salo, E.: Isolation and expression of a Pax-6 gene in the regenerating and intact Planarian Dugesia(G)tigrina. Proc. Natl. Acad. Sci. USA 96, 558-563 (1999).

Hauck, B., Gehring, W.J., and Walldorf, U.: Functional analysis of an eye specific enhancer of the eyeless gene in Drosophila. Proc. Natl. Acad. Sci USA 96, 564-569 (1999).

Janssens, H., and Gehring, W.J.: Isolation and Characterization of drosocrystallin, a Lens Crystallin Gene of Drosophila melanogaster. Dev. Biol. 207, 204-214 (1999).

Czerny, T., Halder, G., Callaerts, P., Kloter, U., Souabni, A., Gehring, W.J., and Busslinger, M.: Twin of eyeless, a second Pax-6 gene of Drosophila, acts upstream of eyeless in the control of eye development. Mol. Cell 3, 297-307 (1999).

Niimi, T., Seimiya, M., Kloter, U., Flister, S. and Gehring, W.J.: Direct regulatory interaction of the eyeless protein with an eye-specific enhancer in the sine oculis gene during eye induction in Drosophila. Development 126, 2253-2260 (1999).

Tarpin, M., Gehring W.J., and Biérne J.: Reverse homeosis in homeotically reconstructed ribbonworms. Proc. Natl. Acad. Sci. USA, 96 11900-11903 (1999).

Kurata, S., Go, M.J., Artavanis-Tsakonas, S., and Gehring, W.J.: Notch signalling and the determination of appendage identity. Proc. Natl. Acad. Sci. USA, in press.

Gehring, W.J., and Ikeo, K.: Pax 6. Mastering eye morphogenesis and eye evolution. Trends in Genetics 15, 371-377 (1999).

Gröger H., Callaerts P., Gehring, W.J., Schmid, V.: Gene Duplication and Recruitment of a Specific Tropomyosin into Striated Muscle Cells in the Jellyfish Podocoryne carnea. J. Exp. Zool. (Mol Dev Evol) 285, 378-386 (1999).