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Ochoa-Espinosa, Amanda; Harmansa, Stefan; Caussinus, Emmanuel; Affolter, Markus (2017). Myosin II is not required for Drosophila tracheal branch elongation and cell intercalation. Development (Cambridge, England), 144(16), 2961-2968.
Tsankova, Anna; Pham, Tri Thanh; Garcia, David Salvador; Otte, Fabian; Cabernard, Clemens (2017). Cell Polarity Regulates Biased Myosin Activity and Dynamics during Asymmetric Cell Division via Drosophila Rho Kinase and Protein Kinase N. Developmental cell, 42(2), 143-155.e5.
Baudrimont, Antoine; Voegeli, Sylvia; Viloria, Eduardo Calero; Stritt, Fabian; Lenon, Marine; Wada, Takeo; Jaquet, Vincent; Becskei, Attila (2017). Multiplexed gene control reveals rapid mRNA turnover. Science advances, 3(7), e1700006.
Vettiger, Andrea; Winter, Julius; Lin, Lin; Basler, Marek (2017). The type VI secretion system sheath assembles at the end distal from the membrane anchor. Nature communications, 8, 16088.
Blandino-Rosano, Manuel; Barbaresso, Rebecca; Jimenez-Palomares, Margarita; Bozadjieva, Nadejda; Werneck-de-Castro, Joao Pedro; Hatanaka, Masayuki; Mirmira, Raghavendra G; Sonenberg, Nahum; Liu, Ming; Rüegg, Markus A; Hall, Michael N; Bernal-Mizrachi, Ernesto (2017). Loss of mTORC1 signalling impairs β-cell homeostasis and insulin processing. Nature communications, 8, 16014.
Sundaramurthy, Varadharajan; Korf, Hannelie; Singla, Ashima; Scherr, Nicole; Nguyen, Liem; Ferrari, Giorgio; Landmann, Regine; Huygen, Kris; Pieters, Jean (2017). Survival of Mycobacterium tuberculosis and Mycobacterium bovis BCG in lysosomes in vivo. Microbes and infection, , 1-12.
Matsuda, Shinya; Affolter, Markus (2017). Dpp from the anterior stripe of cells is crucial for the growth of the Drosophila wing disc. eLife, 6, e22319.
Wang, Congwei; Schmich, Fabian; Weidner, Julie; Beerenwinkel, Niko; Spang, Anne (2017). Context-dependent deposition and regulation of mRNAs in P-bodies. bioRxiv, , 1-44.
Bumann, Dirk; Schothorst, Joep (2017). Intracellular Salmonella metabolism. Cellular microbiology, , e12766.
Reinhard, Judith R; Lin, Shuo; McKee, Karen K; Meinen, Sarina; Crosson, Stephanie C; Sury, Maurizio; Hobbs, Samantha; Maier, Geraldine; Yurchenco, Peter D; Rüegg, Markus A (2017). Linker proteins restore basement membrane and correct LAMA2-related muscular dystrophy in mice. Science translational medicine, 9(396), eaal4649.
Benjamin, Don; Hall, Michael N (2017). mTORC1 Controls Synthesis of Its Activator GTP. Cell reports, 19(13), 2643-2644.
Regenbogen, Bianca; Willmann, Matthias; Steglich, Matthias; Bunk, Boyke; Nübel, Ulrich; Peter, Silke; Neher, Richard A (2017). Rapid and consistent evolution of colistin resistance in XDR Pseudomonas aeruginosa during morbidostat culture. Antimicrobial agents and chemotherapy, , 31.
Paul, Alex; Chaker, Zayna; Doetsch, Fiona (2017). Hypothalamic regulation of regionally distinct adult neural stem cells and neurogenesis. Science (New York, N.Y.), 356(6345), 1383-1386.
Brodmann, Maj; Dreier, Roland F; Broz, Petr; Basler, Marek (2017). Francisella requires dynamic type VI secretion system and ClpB to deliver effectors for phagosomal escape. Nature communications, 8, 15853.
Brackmann, Maximilian; Nazarov, Sergey; Wang, Jing; Basler, Marek (2017). Using Force to Punch Holes: Mechanics of Contractile Nanomachines. Trends in cell biology, , epub.
Meunier, Etienne; Broz, Petr (2017). Evolutionary Convergence and Divergence in NLR Function and Structure. Trends in immunology, , Epub.
Willmann, Raffaella; Gordish-Dressman, Heather; Meinen, Sarina; Rüegg, Markus A; Yu, Qing; Nagaraju, Kanneboyina; Kumar, Ayar; Girgenrath, Mahasweta; Coffey, Caroline B M; Cruz, Vivian; Van Ry, Pam M; Bogdanik, Laurent; Lutz, Cathleen; Rutkowski, Anne; Burkin, Dean J (2017). Improving Reproducibility of Phenotypic Assessments in the DyW Mouse Model of Laminin-α2 Related Congenital Muscular Dystrophy. Journal of neuromuscular diseases, 4(2), 115-126.
You, Yuan; Sawikowska, Aneta; Neumann, Manuela; Posé, David; Capovilla, Giovanna; Langenecker, Tobias; Neher, Richard A; Krajewski, Pawel; Schmid, Markus (2017). Temporal dynamics of gene expression and histone marks at the Arabidopsis shoot meristem during flowering. Nature communications, 8, 15120.
Zanini, Fabio; Puller, Vadim; Brodin, Johanna; Albert, Jan; Neher, Richard A (2017). In vivo mutation rates and the landscape of fitness costs of HIV-1. Virus evolution, 3(1), vex003.
Freytag, Virginie; Carrillo-Roa, Tania; Milnik, Annette; Sämann, Philipp G; Vukojevic, Vanja; Coynel, David; Demougin, Philippe; Egli, Tobias; Gschwind, Leo; Jessen, Frank; Loos, Eva; Maier, Wolfgang; Riedel-Heller, Steffi G; Scherer, Martin; Vogler, Christian; Wagner, Michael; Binder, Elisabeth B; de Quervain, Dominique J-F; Papassotiropoulos, Andreas (2017). A peripheral epigenetic signature of immune system genes is linked to neocortical thickness and memory. Nature communications, 8, 15193.
Tome-Garcia, Jessica; Tejero, Rut; Nudelman, German; Yong, Raymund L; Sebra, Robert; Wang, Huaien; Fowkes, Mary; Magid, Margret; Walsh, Martin; Silva-Vargas, Violeta; Zaslavsky, Elena; Friedel, Roland H; Doetsch, Fiona; Tsankova, Nadejda M (2017). Prospective Isolation and Comparison of Human Germinal Matrix and Glioblastoma EGFR(+) Populations with Stem Cell Properties. Stem cell reports, 8(5), 1421-1429.
Estoppey, David; Lee, Chia Min; Janoschke, Marco; Lee, Boon Heng; Wan, Kah Fei; Dong, Hongping; Mathys, Philippe; Filipuzzi, Ireos; Schuhmann, Tim; Riedl, Ralph; Aust, Thomas; Galuba, Olaf; McAllister, Gregory; Russ, Carsten; Spiess, Martin; Bouwmeester, Tewis; Bonamy, Ghislain M C; Hoepfner, Dominic (2017). The Natural Product Cavinafungin Selectively Interferes with Zika and Dengue Virus Replication by Inhibition of the Host Signal Peptidase. Cell Reports, 19(3), 451-460.
Dimitrova, Yoana; Gruber, Andreas J; Mittal, Nitish; Ghosh, Souvik; Dimitriades, Beatrice; Mathow, Daniel; Grandy, William Aaron; Christofori, Gerhard; Zavolan, Mihaela (2017). TFAP2A is a component of the ZEB1/2 network that regulates TGFB1-induced epithelial to mesenchymal transition. Biology direct, 12(1), 8.
Gallaud, Emmanuel; Pham, Tri; Cabernard, Clemens (2017). Drosophila melanogaster Neuroblasts: A Model for Asymmetric Stem Cell Divisions. Results and problems in cell differentiation, 61, 183-210.
Harmansa, Stefan; Alborelli, Ilaria; Bieli, Dimitri; Caussinus, Emmanuel; Affolter, Markus (2017). A nanobody-based toolset to investigate the role of protein localization and dispersal in Drosophila. eLife, 6, 22549.
Xu, Yanyan; Seelig, Anna; Bernèche, Simon (2017). Unidirectional Transport Mechanism in an ATP Dependent Exporter. ACS central science, 3(3), 250-258.
Domingues, Patrícia Henriques; Nanduri, Lalitha S Y; Seget, Katarzyna; Venkateswaran, Sharavan V; Agorku, David; Viganó, Cristina; von Schubert, Conrad; Nigg, Erich A; Swanton, Charles; Sotillo, Rocio; Bosio, Andreas; Storchová, Zuzana; Hardt, Olaf (2017). Cellular prion protein PRPC and ecto-5'-nucleotidase are markers of the cellular stress response to aneuploidy. Cancer research, , 34.
Nakajima, Hiroyuki; Yamamoto, Kimiko; Agarwala, Sobhika; Terai, Kenta; Fukui, Hajime; Fukuhara, Shigetomo; Ando, Koji; Miyazaki, Takahiro; Yokota, Yasuhiro; Schmelzer, Etienne; Belting, Heinz-Georg; Affolter, Markus; Lecaudey, Virginie; Mochizuki, Naoki (2017). Flow-Dependent Endothelial YAP Regulation Contributes to Vessel Maintenance. Developmental Cell, 40(6), 523-536.
Petrovska, Jana; Coynel, David; Fastenrath, Matthias; Milnik, Annette; Auschra, Bianca; Egli, Tobias; Gschwind, Leo; Hartmann, Francina; Loos, Eva; Sifalakis, Klara; Vogler, Christian; de Quervain, Dominique J.-F.; Papassotiropoulos, Andreas; Heck, Angela (2017). The NCAM1 gene set is linked to depressive symptoms and their brain structural correlates in healthy individuals. Journal of Psychiatric Research, 91, 116-123.
Gencoglu, Mumun; Schmidt, Alexander; Becskei, Attila (2017). Measurement of in vivo protein binding affinities in a signaling network with mass spectrometry. ACS synthetic biology, , 10.1021/acssynbio.6b00282.
Sprecher, Kathrin S; Hug, Isabelle; Nesper, Jutta; Potthoff, Eva; Mahi, Mohamed-Ali; Sangermani, Matteo; Kaever, Volkhard; Schwede, Torsten; Vorholt, Julia; Jenal, Urs (2017). Cohesive Properties of the Caulobacter crescentus Holdfast Adhesin Are Regulated by a Novel c-di-GMP Effector Protein. mBio, 8(2), e00294-17.
Maier, Timm (2017). Fatty acid synthases: Re-engineering biofactories. Nature chemical biology, 13(4), 344-345.
Vullo, Sabrina; Bonifacio, Gaetano; Roy, Sophie; Johner, Niklaus; Bernèche, Simon; Kellenberger, Stephan (2017). Conformational dynamics and role of the acidic pocket in ASIC pH-dependent gating. Proceedings of the National Academy of Sciences of the United States of America, , Epub ahead of print.
Rion, Nathalie; Rüegg, Markus A (2017). LncRNA-encoded peptides: More than translational noise?. Cell research, 27(5), 604-605.
Sauteur, Loïc; Affolter, Markus; Belting, Heinz-Georg (2017). Distinct and redundant functions of Esam and VE-cadherin during vascular morphogenesis. Development, 144, 1554-1565.
Stuttfeld, Edward; Imseng, Stefan; Maier, Timm (2017). A central role for a region in the middle. eLife, 6, e25700.
Mueller, Philipp; Pieters, Jean (2017). Identification of mycobacterial GarA as a substrate of protein kinase G from M. tuberculosis using a KESTREL-based proteome wide approach. Journal of microbiological methods, 136, 34-39.
Kupr, Barbara; Schnyder, Svenia; Handschin, Christoph (2017). Role of Nuclear Receptors in Exercise-Induced Muscle Adaptations. Cold Spring Harbor perspectives in medicine, 7(6), a029835.
Storm, Philip A; Herbst, Dominik A; Maier, Timm; Townsend, Craig A (2017). Functional and Structural Analysis of Programmed C-Methylation in the Biosynthesis of the Fungal Polyketide Citrinin. Cell chemical biology, , Available Online.
Schnyder, Svenia; Svensson, Kristoffer; Cardel, Bettina; Handschin, Christoph (2017). Muscle PGC-1α is required for long-term systemic and local adaptations to a ketogenic diet in mice. American Journal of Physiology. Endocrinology and Metabolism, 312(5), E437-E446.
Romano, Valentina; de Beer, Tjaart A P; Schwede, Torsten (2017). A computational protocol to evaluate the effects of protein mutants in the kinase gatekeeper position on the binding of ATP substrate analogues. BMC research notes, 10(1), 104.
Riba, Andrea; Emmenlauer, Mario; Chen, Amy; Sigoillot, Frederic; Cong, Feng; Dehio, Christoph; Jenkins, Jeremy; Zavolan, Mihaela (2017). Explicit Modeling of siRNA-Dependent On- and Off-Target Repression Improves the Interpretation of Screening Results. Cell systems, 4(2), 182-193.e4.
McKee, Karen K; Crosson, Stephanie C; Meinen, Sarina; Reinhard, Judith R; Rüegg, Markus A; Yurchenco, Peter D (2017). Chimeric protein repair of laminin polymerization ameliorates muscular dystrophy phenotype. The Journal of clinical investigation, 127(3), 1075-1089.
Starek, Greg; Freites, J Alfredo; Bernèche, Simon; Tobias, Douglas J (2017). Gating energetics of a voltage-dependent K(+) channel pore domain. Journal of computational chemistry, , Epub ahead of print.
Schwarz, Olivia; Bohra, Ali Asgar; Liu, Xinyu; Reichert, Heinrich; VijayRaghavan, Krishnaswamy; Pielage, Jan (2017). Motor control of Drosophila feeding behavior. eLife, 2017/6, e19892.
Stevens, Julia; Spang, Anne (2017). Attenuation of N-glycosylation causes polarity and adhesion defects in the C. elegans embryo. Journal of cell science, 130(7), 1224-1331.
Haralampieva, Deana; Salemi, Souzan; Dinulovic, Ivana; Sulser, Tullio; Ametamey, Simon; Handschin, Christoph; Eberli, Daniel (2017). Human muscle precursor cells overexpressing PGC-1α enhance early skeletal muscle tissue formation. Cell transplantation, 26(6), 1103-14.
Jaquet, Vincent; Hsu, Chieh; Becskei, Attila (2017). Measurement of bistability in a multidimensional parameter space. Integrative biology (Cambridge), 9(2), 167-177.
Fava, Luca L; Schuler, Fabian; Sladky, Valentina; Haschka, Manuel D; Soratroi, Claudia; Eiterer, Lisa; Demetz, Egon; Weiss, Guenter; Geley, Stephan; Nigg, Erich A; Villunger, Andreas (2017). The PIDDosome activates p53 in response to supernumerary centrosomes. Genes & development, 31(1), 34-45.
Beuret, Nicole; Hasler, Franziska; Prescianotto-Baschong, Cristina; Birk, Julia; Rutishauser, Jonas; Spiess, Martin (2017). Amyloid-like aggregation of provasopressin in diabetes insipidus and secretory granule sorting. BMC biology, 15(1), 5.
Schürmann, Nura; Forrer, Pascal; Casse, Olivier; Li, Jiagui; Felmy, Boas; Burgener, Anne-Valérie; Ehrenfeuchter, Nikolaus; Hardt, Wolf-Dietrich; Recher, Mike; Hess, Christoph; Tschan-Plessl, Astrid; Khanna, Nina; Bumann, Dirk (2017). Myeloperoxidase targets oxidative host attacks to Salmonella and prevents collateral tissue damage. Nature microbiology, 2, 16268.
González, Asier; Hall, Michael N (2017). Nutrient sensing and TOR signaling in yeast and mammals. The EMBO journal, 36(4), 397-408.
Furrer, Regula; Eisele, Petra S; Schmidt, Alexander; Beer, Markus; Handschin, Christoph (2017). Paracrine cross-talk between skeletal muscle and macrophages in exercise by PGC-1α-controlled BNP. Scientific reports, 7, 40789.
Cabernard, Clemens (2017). Sibling cell size matters. eLife, 6, e24038.
Seuring, Carolin; Verasdonck, Joeri; Ringler, Philippe; Cadalbert, Riccardo; Stahlberg, Henning; Böckmann, Anja; Meier, Beat H; Riek, Roland (2017). Amyloid Fibril Polymorphism: Almost Identical on the Atomic Level, Mesoscopically Very Different. The journal of physical chemistry. B, , in press.
Navarra, Giulio; Zihlmann, Pascal; Jakob, Roman P; Stangier, Katia; Preston, Roland C; Rabbani, Said; Smiesko, Martin; Wagner, Bea; Maier, Timm; Ernst, Beat (2017). Carbohydrate-Lectin Interactions - An Unexpected Contribution to Affinity. Chembiochem : a European journal of chemical biology, , epub ahead of print.
Fitter, Stephen; Matthews, Mary P; Martin, Sally K; Xie, Jianling; Ooi, Soo Siang; Walkley, Carl R; Codrington, John D; Ruegg, Markus A; Hall, Michael N; Proud, Christopher G; Gronthos, Stan; Zannettino, Andrew C W (2017). mTORC1 Plays an Important Role in Skeletal Development by Controlling Preosteoblast Differentiation. Molecular and cellular biology, 37(7), 1-20.
Brockhoff, Marielle; Rion, Nathalie; Chojnowska, Kathrin; Wiktorowicz, Tatiana; Eickhorst, Christopher; Erne, Beat; Frank, Stephan; Angelini, Corrado; Furling, Denis; Rüegg, Markus A; Sinnreich, Michael; Castets, Perrine (2017). Targeting deregulated AMPK/mTORC1 pathways improves muscle function in myotonic dystrophy type I. The Journal of clinical investigation, 127(2), 549-563.
Schnyder, Svenia; Kupr, Barbara; Handschin, Christoph (2017). Coregulator-mediated control of skeletal muscle plasticity - A mini-review. Biochimie, 136, 49-54.
Ochoa-Espinosa, A; Harmansa, S; Caussinus, E; Affolter, M (2017). Myosin II activity is not required for Drosophila tracheal branching morphogenesis. bioRxiv, 6 January 2017, 1-22.
Maleki, Farzaneh; Becskei, Attila (2017). An open-loop approach to calculate noise-induced transitions. Journal of theoretical biology, 415, 145-157.
Hoya, Marta; Yanguas, Francisco; Moro, Sandra; Prescianotto-Baschong, Cristina; Doncel, Cristina; de León, Nagore; Curto, M-Ángeles; Spang, Anne; Valdivieso, M-Henar (2017). Traffic Through the Trans-Golgi Network and the Endosomal System Requires Collaboration Between Exomer and Clathrin Adaptors in Fission Yeast. Genetics, 205(2), 673-690.
Assmus, Frauke; Ross, Alfred; Fischer, Holger; Seelig, Joachim; Seelig, Anna (2017). (31)P and (1)H NMR Studies of the Molecular Organization of Lipids in the Parallel Artificial Membrane Permeability Assay. Molecular pharmaceutics, 14(1), 284-295.
Tsachaki, Maria; Meyer, Arne; Weger, Benjamin; Kratschmar, Denise V.; Tokarz, Janina; Adamski, Jerzy; Belting, Heinz-Georg; Affolter, Markus; Dickmeis, Thomas; Odermatt, Alex (2017). Absence of 11-keto reduction of cortisone and 11-ketotestosterone in the model organism zebrafish. Journal of Endocrinology, 232(2), 323-335.
Junne, Tina; Spiess, Martin (2017). Integration of transmembrane domains is regulated by their downstream sequences. Journal of cell science, 130, 372-381.
Bienert, Stefan; Waterhouse, Andrew; de Beer, Tjaart A P; Tauriello, Gerardo; Studer, Gabriel; Bordoli, Lorenza; Schwede, Torsten (2017). The SWISS-MODEL Repository-new features and functionality. Nucleic acids research, 45(D1), D313-D319.
Stanger, Frédéric V.; de Beer, Tjaart A. P.; Dranow, David M.; Schirmer, Tilman; Phan, Isabelle; Dehio, Christoph (2017). The BID Domain of Type IV Secretion Substrates Forms a Conserved Four-Helix Bundle Topped with a Hook. Structure, 25(1), 203-211.
Ross, Jacob Alexander; Pearson, Adam; Levy, Yotam; Cardel, Bettina; Handschin, Christoph; Ochala, Julien (2017). Exploring the Role of PGC-1α in Defining Nuclear Organisation in Skeletal Muscle Fibres. Journal of Cellular Physiology, 232(6), 1270-1274.
Rheinberger, Jan; Hassaine, Ghérici; Chami, Mohamed; Stahlberg, Henning; Vogel, Horst; Li, Xiaodan (2017). Two-dimensional crystallization of the mouse serotonin 5-HT3A receptor. Micron (Oxford, England : 1993), 92, 19-24.
Heck, Angela; Milnik, Annette; Vukojevic, Vanja; Petrovska, Jana; Egli, Tobias; Singer, Jochen; Escobar, Pablo; Sengstag, Thierry; Coynel, David; Freytag, Virginie; Fastenrath, Matthias; Demougin, Philippe; Loos, Eva; Hartmann, Francina; Schicktanz, Nathalie; Delarue Bizzini, Bernardo; Vogler, Christian; Kolassa, Iris-Tatjana; Wilker, Sarah; Elbert, Thomas; Schwede, Torsten; Beisel, Christian; Beerenwinkel, Niko; de Quervain, Dominique J.-F.; Papassotiropoulos, Andreas (2017). Exome sequencing of healthy phenotypic extremes links TROVE2 to emotional memory and PTSD. Nature Human Behaviour, 1, 0081.
Lang, Mathias; Mori, Mayumi; Ruer-Laventie, Julie; Pieters, Jean (2017). A coronin 1-dependent decision switch in juvenile mice determines population of the peripheral naïve T cell compartment. J. Immunol., , in press.
Emilsson, Gustav; Schoch, Rafael L; Oertle, Philipp; Xiong, Kunli; Lim, Roderick YH; Dahlin, Andreas B (2017). Surface plasmon resonance methodology for monitoring polymerization kinetics and morphology changes of brushes - evaluated with poly(N-isopropylacrylamide). Applied Surface Science, 396, 384-392.
Sharma, Deepika; Gerspach, Michael A; Pfohl, Thomas; Lim, Roderick YH; Ekinci, Y (2017). Single positively charged particle trapping in nanofluidic systems. Microelectronic Engineering, 175, 43-49.
Sakiyama, Yusuke; Panatala, Radhakrishnan; Lim, Roderick Y H (2017). Structural dynamics of the nuclear pore complex. Seminars in Cell and Developmental Biology, , doi.org/10.1016/j.semcdb.2017.05.021.
Daina, Antoine; Blatter, Marie-Claude; Baillie Gerritsen, Vivienne; Palagi, Patricia M.; Marek, Diana; Xenarios, Ioannis; Schwede, Torsten; Michielin, Olivier; Zoete, Vincent (2017). Drug Design Workshop: A Web-Based Educational Tool To Introduce Computer-Aided Drug Design to the General Public. Journal of Chemical Education, 94(3), 335-344.
Roth, Christian; Weizenmann, Nicole; Bexten, Nicola; Saenger, Wolfram; Zimmermann, Wolfgang; Maier, Timm; Sträter, Norbert (2017). Amylose recognition and ring-size determination of amylomaltase. Science Advances, 3(1), e1601386.
Broz, Petr (2016). Inflammasomes in Host Defense and Autoimmunity. Chimia, 70(12), 853-855.
Artimo, Panu; Duvaud, Séverine; Pachkov, Mikhail; Ioannidis, Vassilios; van Nimwegen, Erik; Stockinger, Heinz (2016). The ISMARA client. F1000Research, 5(Elixir), 2851.
Zanini, Fabio; Brodin, Johanna; Albert, Jan; Neher, Richard A (2016). Error rates, PCR recombination, and sampling depth in HIV-1 whole genome deep sequencing. Virus research, , 9.
McLeod, Robert A; Kowal, Julia; Ringler, Philippe; Stahlberg, Henning (2016). Robust image alignment for cryogenic transmission electron microscopy. Journal of structural biology, , in press.
Gumienny, Rafal; Jedlinski, Dominik J; Schmidt, Alexander; Gypas, Foivos; Martin, Georges; Vina-Vilaseca, Arnau; Zavolan, Mihaela (2016). High-throughput identification of C/D box snoRNA targets with CLIP and RiboMeth-seq. Nucleic acids research, , [Epub ahead of print].
Benjamin, Don; Colombi, Marco; Hindupur, Sravanth K; Betz, Charles; Lane, Heidi A; El-Shemerly, Mahmoud Y M; Lu, Min; Quagliata, Luca; Terracciano, Luigi; Moes, Suzette; Sharpe, Timothy; Wodnar-Filipowicz, Aleksandra; Moroni, Christoph; Hall, Michael N (2016). Syrosingopine sensitizes cancer cells to killing by metformin. Science advances, 2(12), e1601756.
Bibow, Stefan; Polyhach, Yevhen; Eichmann, Cédric; Chi, Celestine N; Kowal, Julia; Albiez, Stefan; McLeod, Robert A; Stahlberg, Henning; Jeschke, Gunnar; Güntert, Peter; Riek, Roland (2016). Solution structure of discoidal high-density lipoprotein particles with a shortened apolipoprotein A-I. Nature structural & molecular biology, , in press.
Mauger, Oriane; Lemoine, Frédéric; Scheiffele, Peter (2016). Targeted Intron Retention and Excision for Rapid Gene Regulation in Response to Neuronal Activity. Neuron, 92(6), 1266-1278.
Nguyen, Thi-Minh; Schreiner, Dietmar; Xiao, Le; Traunmüller, Lisa; Bornmann, Caroline; Scheiffele, Peter (2016). An alternative splicing switch shapes neurexin repertoires in principal neurons versus interneurons in the mouse hippocampus. eLife, 5, e22757.
Dinulovic, Ivana; Furrer, Regula; Beer, Markus; Ferry, Arnaud; Cardel, Bettina; Handschin, Christoph (2016). Muscle PGC-1α modulates satellite cell number and proliferation by remodeling the stem cell niche. Skeletal Muscle, 6(1), 39.
Arquint, Christian; Nigg, Erich A (2016). The PLK4-STIL-SAS-6 module at the core of centriole duplication. Biochemical Society transactions, 44(5), 1253-1263.
Jukić, M M; Opel, N; Ström, J; Carrillo-Roa, T (2016). Elevated CYP2C19 expression is associated with depressive symptoms and hippocampal homeostasis impairment. Molecular psychiatry, , doi: 10.1038/mp.2016.204.
Guimaraes, Joao C; Zavolan, Mihaela (2016). Patterns of ribosomal protein expression specify normal and malignant human cells. Genome biology, 17(1), 236.
Ruder, Ludwig; Takeoka, Aya; Arber, Silvia (2016). Long-Distance Descending Spinal Neurons Ensure Quadrupedal Locomotor Stability. Neuron, 92(5), 1063-1078.
Arnold, Stefan A; Albiez, Stefan; Bieri, Andrej; Syntychaki, Anastasia; Adaixo, Ricardo; McLeod, Robert A; Goldie, Kenneth N; Stahlberg, Henning; Braun, Thomas (2016). Blotting-free and lossless cryo-electron microscopy grid preparation from nanoliter-sized protein samples and single-cell extracts. Journal of structural biology, , in press.
Brodin, Johanna; Zanini, Fabio; Thebo, Lina; Lanz, Christa; Bratt, Göran; Neher, Richard A; Albert, Jan (2016). Establishment and stability of the latent HIV-1 DNA reservoir. eLife, 5, 15.
Castets, Perrine; Frank, Stephan; Sinnreich, Michael; Rüegg, Markus A (2016). "Get the Balance Right": Pathological Significance of Autophagy Perturbation in Neuromuscular Disorders. Journal of neuromuscular diseases, 3(2), 127-155.
Boullé, Mikaël; Müller, Thorsten G; Dähling, Sabrina; Ganga, Yashica; Jackson, Laurelle; Mahamed, Deeqa; Oom, Lance; Lustig, Gila; Neher, Richard A; Sigal, Alex (2016). HIV Cell-to-Cell Spread Results in Earlier Onset of Viral Gene Expression by Multiple Infections per Cell. PLoS pathogens, 12(11), e1005964.
Ding, Xiaolei; Bloch, Wilhelm; Iden, Sandra; Rüegg, Markus A; Hall, Michael N; Leptin, Maria; Partridge, Linda; Eming, Sabine A (2016). mTORC1 and mTORC2 regulate skin morphogenesis and epidermal barrier formation. Nature communications, 7, 13226.
Guri, Yakir; Hall, Michael N. (2016). mTOR Signaling Confers Resistance to Targeted Cancer Drugs. Trends in Cancer, 2(11), 688-97.
Valentini, Martina; Laventie, Benoît-Joseph; Moscoso, Joana; Jenal, Urs; Filloux, Alain (2016). The Diguanylate Cyclase HsbD Intersects with the HptB Regulatory Cascade to Control Pseudomonas aeruginosa Biofilm and Motility. PLoS genetics, 12(10), e1006354.
Pasakarnis, Laurynas; Frei, Erich; Caussinus, Emmanuel; Affolter, Markus; Brunner, Damian (2016). Amnioserosa cell constriction but not epidermal actin cable tension autonomously drives dorsal closure. Nat Cell Biol, 18(11), 1161-1172.
Broder, Ursula N; Jaeger, Tina; Jenal, Urs (2016). LadS is a calcium-responsive kinase that induces acute-to-chronic virulence switch in Pseudomonas aeruginosa. Nature microbiology, 2, 16184.
Caussinus, Emmanuel; Affolter, Markus (2016). deGradFP: A System to Knockdown GFP-Tagged Proteins. Methods Mol Biol, 1478, 177-187.
Moschetti, Tommaso; Sharpe, Timothy; Fischer, Gerhard; Marsh, May E; Ng, Hong Kin; Morgan, Matthew; Scott, Duncan E; Blundell, Tom L; R Venkitaraman, Ashok; Skidmore, John; Abell, Chris; Hyvönen, Marko (2016). Engineering Archeal Surrogate Systems for the Development of Protein-Protein Interaction Inhibitors against Human RAD51. Journal of molecular biology, 428(23), 4589-4607.
Tchang, Vincent Sam Yong; Stiess, Michael; Siegmund, Kerstin; Karrer, Urs; Pieters, Jean (2016). Role for coronin 1 in mouse NK cell function. Immunobiology, , 30372-2.
Fleming, Michael S; Li, Jian J; Ramos, Daniel; Li, Tong; Talmage, David A; Abe, Shin-Ichi; Arber, Silvia; Luo, Wenqin (2016). A RET-ER81-NRG1 Signaling Pathway Drives the Development of Pacinian Corpuscles. The Journal of neuroscience : the official journal of the Society for Neuroscience, 36(40), 10337-10355.
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Kuert, Philipp A.; Bello, Bruno C.; Reichert, Heinrich (2012). The labial gene is required to terminate proliferation of identified neuroblasts in postembryonic development of the Drosophila brain. Biology open, 1(10), 1006-1015.
Dehio, Christoph; Berry, Colin; Bartenschlager, Ralf (2012). Persistent intracellular pathogens. FEMS microbiology reviews, 36(3), 513-513.
Kudryashev, Mikhail; Castaño-Díez, Daniel; Stahlberg, Henning (2012). Limiting factors in single particle cryo electron tomography. Computational and structural biotechnology journal, 1(1), e201207002.
Berger, Christian; Harzer, Heike; Burkard, Thomas R; Steinmann, Jonas; van der Horst, Suzanne; Laurenson, Anne-Sophie; Novatchkova, Maria; Reichert, Heinrich; Knoblich, Juergen A (2012). FACS purification and transcriptome analysis of drosophila neural stem cells reveals a role for Klumpfuss in self-renewal. Cell reports, 2(2), 407-18.
Cybulski, Nadine; Zinzalla, Vittoria; Hall, Michael N (2012). Inducible raptor and rictor Knockout Mouse Embryonic Fibroblasts. Methods in molecular biology (Humana Press), 821, 267-78.
Bischoff, Vincent; Deogracias, Rubén; Poirier, Françoise; Barde, Yves-Alain (2012). Seizure-induced neuronal death is suppressed in the absence of the endogenous lectin Galectin-1. Journal of neuroscience, 32(44), 15590-600.
Petters, Tobias; Zhang, Xin; Nesper, Jutta; Treuner-Lange, Anke; Gomez-Santos, Nuria; Hoppert, Michael; Jenal, Urs; Søgaard-Andersen, Lotte (2012). The orphan histidine protein kinase SgmT is a c-di-GMP receptor and regulates composition of the extracellular matrix together with the orphan DNA binding response regulator DigR in Myxococcus xanthus. Molecular Microbiology, 84(1), 147-65.
Martin, Georges; Gruber, Andreas R; Keller, Walter; Zavolan, Mihaela (2012). Genome-wide Analysis of Pre-mRNA 3′ End Processing Reveals a Decisive Role of Human Cleavage Factor I in the Regulation of 3′ UTR Length. Cell reports, 1(6), 753-63.
Eicher, Simone C; Dehio, Christoph (2012). Bartonella entry mechanisms into mammalian host cells. Cellular microbiology, 14(8), 1166-73.
Pulliainen, Arto T; Pieles, Kathrin; Brand, Cameron S; Hauert, Barbara; Böhm, Alex; Quebatte, Maxime; Wepf, Alexander; Gstaiger, Matthias; Aebersold, Ruedi; Dessauer, Carmen W; Dehio, Christoph (2012). Bacterial effector binds host cell adenylyl cyclase to potentiate Gαs-dependent cAMP production. Proceedings of the National Academy of Sciences of the United States of America, 109(24), 9581-6.
Krützfeldt, Jan; Rösch, Nora; Hausser, Jean; Manoharan, Muthiah; Zavolan, Mihaela; Stoffel, Markus (2012). MicroRNA-194 is a target of transcription factor 1 (Tcf1, Hnf1α) in adult liver and controls expression of frizzled-6. Hepatology, 55(1), 98-107.
Oehring, Sophie C; Woodcroft, Ben J; Moes, Suzette; Wetzel, Johanna; Dietz, Olivier; Pulfer, Andreas; Dekiwadia, Chaitali; Maeser, Pascal; Flueck, Christian; Witmer, Kathrin; Brancucci, Nicolas M B; Niederwieser, Igor; Jenoe, Paul; Ralph, Stuart A; Voss, Till S (2012). Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Genome biology, 13(11), R108.
Kolla, Varaprasad; Jenö, Paul; Moes, Suzette; Lapaire, Olav; Hoesli, Irene; Hahn, Sinuhe (2012). Quantitative proteomic (iTRAQ) analysis of 1st trimester maternal plasma samples in pregnancies at risk for preeclampsia. Journal of biomedicine and biotechnolgy, 2012, 305964.
Jayachandran, Rajesh; BoseDasgupta, Somdeb; Pieters, Jean (2012). Surviving the Macrophage: Tools and Tricks Employed by Mycobacterium tuberculosis. Current topics in microbiology and immunology, 374, 189-209.
Janssen, Saskia; Jayachandran, Rajesh; Khathi, Lulama; Zinsstag, Jakob; Grobusch, Martin P; Pieters, Jean (2012). Exploring prospects of novel drugs for tuberculosis. Drug design, development and therapy, 6, 217-24.
Henrich, Paul B; Monnier, Christophe A; Halfter, Willi; Haritoglou, Christos; Strauss, Rupert W; Lim, Roderick Y H; Loparic, Marko (2012). Nanoscale topographic and biomechanical studies of the human internal limiting membrane. Investigative ophthalmology & visual science, 53(6), 2561-70.
Lim, Roderick Y H; Herrmann, Harald (2012). From structural architecture to cellular organization : celebrating the scientific contributions of Ueli Aebi on the occasion of his retirement. Journal of structural biology, 177(1), 1-2.
Papadopoulos, Dimitrios K; Skouloudaki, Kassiani; Adachi, Yoshitsugu; Samakovlis, Christos; Gehring, Walter J (2012). Dimer formation via the homeodomain is required for function and specificity of Sex combs reduced in Drosophila. Developmental biology, 367(1), 78-89.
Graziussi, Daria Federica; Suga, Hiroshi; Schmid, Volker; Gehring, Walter Jakob (2012). The "eyes absent" (eya) gene in the eye-bearing hydrozoan jellyfish Cladonema radiatum : conservation of the retinal determination network. Journal of experimental zoology. Part B, Molecular and developmental evolution, 318B(4), 257-267.
Gehring, Walter J (2012). The animal body plan, the prototypic body segment, and eye evolution. Evolution & development, 14(1), 34-46.
Plodinec, Marija; Loparic, Marko; Monnier, Christophe A; Obermann, Ellen C; Zanetti-Dallenbach, Rosanna; Oertle, Philipp; Hyotyla, Janne T; Aebi, Ueli; Bentires-Alj, Mohamed; Lim, Roderick Y H; Schoenenberger, Cora-Ann (2012). The nanomechanical signature of breast cancer. Nature nanotechnology, 7(11), 757-65.
Arber, Silvia (2012). Motor circuits in action : specification, connectivity, and function. Neuron, 74(6), 975-89.
Kocik, Lucyna; Junne, Tina; Spiess, Martin (2012). Orientation of Internal Signal-Anchor Sequences at the Sec61 Translocon. Journal of molecular biology, 424(5), 368-78.
Yazdani, Morteza; Deogracias, Rubén; Guy, Jacky; Poot, Raymond A; Bird, Adrian; Barde, Yves-Alain (2012). Disease Modeling Using Embryonic Stem Cells : MeCP2 Regulates Nuclear Size and RNA Synthesis in Neurons. Stem cells, 30(10), 2128-39.
Kemmerling, Simon; Ziegler, Jörg; Schweighauser, Gabriel; Arnold, Stefan; Giss, Dominic; Müller, Shirley A.; Ringler, Philippe; Goldie, Kenneth N.; Goedecke, Niels; Hierlemann, Andreas; Stahlberg, Henning; Engel, Andreas; Braun, Thomas (2012). Connecting micro-fluidics to electron microscopy. Journal of structural biology, 177(1), 128-134.
Li-Blatter, Xiaochun; Beck, Andreas; Seelig, Anna (2012). P-glycoprotein-ATPase modulation: the molecular mechanisms. Biophysical journal, 102(6), 1383-93.
Jiang, Yanrui; Reichert, Heinrich (2012). Programmed cell death in type II neuroblast lineages is required for central complex development in the Drosophila brain. Neural development, 7, 3.
Ochoa-Espinosa, Amanda; Baer, Magdalena M; Affolter, Markus (2012). Tubulogenesis: Src42A Goes to Great Lengths in Tube Elongation. Current biology, 22(11), R446-9.
Castaño-Díez, Daniel; Kudryashev, Mikhail; Arheit, Marcel; Stahlberg, Henning (2012). Dynamo: a flexible, user-friendly development tool for subtomogram averaging of cryo-EM data in high performance computing environments. Journal of structural biology, 178(2), 139-51.
Laurenson, Anne-Sophie; Saini, Nidhi; Jiang, Yanrui; Reichert, Heinrich (2012). Targeted transgenic RNAi knockdown of cell fate determinants induces neoplastic tumor growth and metastasis in a Drosophila transplantation model of neural stem cell derived cancer. Journal of stem cell research & therapy, S12, 2.
Saini, Nidhi; Reichert, Heinrich (2012). Neural stem cells in Drosophila : molecular genetic mechanisms underlying normal neural proliferation and abnormal brain tumor formation. Stem Cells International, 2012, 486169.
Handschin, Christoph; Meyer, Urs A. (2012). Warum reagiert mein Patient anders auf dieses Medikament? : Pharmakogenomik und personalisierte Medizin in der Praxis. Swiss medical forum = Schweizerisches Medizin-Forum, 12(22), 425-433.
Malone, Jacob G; Jaeger, Tina; Manfredi, Pablo; Dötsch, Andreas; Blanka, Andrea; Bos, Raphael; Cornelis, Guy R; Häussler, Susanne; Jenal, Urs (2012). The YfiBNR signal transduction mechanism reveals novel targets for the evolution of persistent pseudomonas aeruginosa in cystic fibrosis airways. PLoS pathogens, 8(6), e1002760.
A S Landsman; E Neftci; D R Muir (2012). Noise robustness and spatially patterned synchronization of cortical oscillators. New Journal of Physics, 14(12), 123031.
Biehlmaier, O.; Neuhauss, S. C.: Behavioral Genetics in Zebrafish to Understand Vertebrate Vision, in: Scott, Jill; Stoeckli, Esther (Ed.). (2012). Neuromedia: Art and Neuroscience Research, New York: Springer , S. 58-67.
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Hardwick, SW; Gubbey, T; Hug, I; Jenal, U; Luisi, BF;  (2012). Crystal structure of Caulobacter crescentus polynucleotide phosphorylase reveals a mechanism of RNA substrate channelling and RNA degradosome assembly. Open Biol, 2(4), 120028.
Heck, Angela; Vogler, Christian; Gschwind, Leo; Ackermann, Sandra; Auschra, Bianca; Spalek, Klara; Rasch, Björn; de Quervain, Dominique; Papassotiropoulos, Andreas (2011). Statistical epistasis and functional brain imaging support a role of voltage-gated potassium channels in human memory. PLoS one, 6(12), e29337.
Iijima, Takatoshi; Wu, Karen; Witte, Harald; Hanno-Iijima, Yoko; Glatter, Timo; Richard, Stéphane; Scheiffele, Peter (2011). SAM68 regulates neuronal activity-dependent alternative splicing of Neurexin-1. Cell, 147(7), 1601-14.
Schötz, Thomas; Neher, Richard A; Gerland, Ulrich (2011). Target search on a dynamic DNA molecule. Physical review. E, Statistical, nonlinear, and soft matter physics, 84(5 Pt 1), 051911.
Suffert, Guillaume; Malterer, Georg; Hausser, Jean; Viiliäinen, Johanna; Fender, Aurélie; Contrant, Maud; Ivacevic, Tomi; Benes, Vladimir; Gros, Frédéric; Voinnet, Olivier; Zavolan, Mihaela; Ojala, Päivi M; Haas, Juergen G; Pfeffer, Sébastien (2011). Kaposi's Sarcoma Herpesvirus microRNAs Target Caspase 3 and Regulate Apoptosis. PLoS Pathogens, 7(12), e1002405.
Loewith, Robbie; Hall, Michael N (2011). Target of Rapamycin (TOR) in nutrient signaling and growth control. Genetics, 189(4), 1177-201.
Stadler, Michael B; Murr, Rabih; Burger, Lukas; Ivanek, Robert; Lienert, Florian; Schöler, Anne; van Nimwegen, Erik; Wirbelauer, Christiane; Oakeley, Edward J; Gaidatzis, Dimos; Tiwari, Vijay K; Schübeler, Dirk (2011). DNA-binding factors shape the mouse methylome at distal regulatory regions. Nature, 480(7378), 490-5.
Ma, Chi H E; Brenner, Gary J; Omura, Takao; Samad, Omar A; Costigan, Michael; Inquimbert, Perrine; Niederkofler, Vera; Salie, Rishard; Sun, Chia Chi; Lin, Herbert Y; Arber, Silvia; Coppola, Giovanni; Woolf, Clifford J; Samad, Tarek A (2011). The BMP coreceptor RGMb promotes while the endogenous BMP antagonist noggin reduces neurite outgrowth and peripheral nerve regeneration by modulating BMP signaling. The Journal of neuroscience : the official journal of the Society for Neuroscience, 31(50), 18391-400.
Romanino, Klaas; Mazelin, Laetitia; Albert, Verena; Conjard-Duplany, Agnès; Lin, Shuo; Bentzinger, C Florian; Handschin, Christoph; Puigserver, Pere; Zorzato, Francesco; Schaeffer, Laurent; Gangloff, Yann-Gaël; Rüegg, Markus A (2011). Myopathy caused by mammalian target of rapamycin complex 1 (mTORC1) inactivation is not reversed by restoring mitochondrial function. Proceedings of the National Academy of Sciences of the United States of America, 108(51), 20808-13.
Borer, Aline S; Wassmann, Paul; Schmidt, Margit; Hoffman, Donald R; Zhou, Jing-Jiang (2011). Crystal structure of Sol i 2 : a major allergen from fire ant venom. Journal of molecular biology, 415(4), 635-48.
Gstaiger, Matthias (2011). Modularity and hormone sensitivity of the Drosophila melanogaster insulin receptor/target of rapamycin interaction proteome. Molecular Systems Biology, 7, 547.

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