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Muir, Dylan R; Kampa, Björn M (2014). FocusStack and StimServer: a new open source MATLAB toolchain for visual stimulation and analysis of two-photon calcium neuronal imaging data.. Frontiers in neuroinformatics, 8, 85.

Sen, Sonia; Cao, Deshou; Choudhary, Ramveer; Biagini, Silvia; Wang, Jing W; Reichert, Heinrich; VijayRaghavan, K (2014). Genetic transformation of structural and functional circuitry rewires the Drosophila brain. eLife, 3, 2014;10.7554/eLife.04407.

Takeoka, Aya; Vollenweider, Isabel; Courtine, Grégoire; Arber, Silvia (2014). Muscle spindle feedback directs locomotor recovery and circuit reorganization after spinal cord injury. Cell, 159(7), 1626-39.

Maier, Lisa; Diard, Médéric; Sellin, Mikael E.; Chouffane, Elsa-Sarah; Trautwein-Weidner, Kerstin; Periaswamy, Balamurugan; Slack, Emma; Dolowschiak, Tamas; Stecher, Bärbel; Loverdo, Claude; Regoes, Roland R.; Hardt, Wolf-Dietrich (2014). Granulocytes impose a tight bottleneck upon the gut luminal pathogen population during Salmonella typhimurium colitis. PLoS Pathogens, 10(12), e1004557.

Rabani, Michal; Raychowdhury, Raktima; Jovanovic, Marko; Rooney, Michael; Stumpo, Deborah J.; Pauli, Andrea; Hacohen, Nir; Schier, Alexander F.; Blackshear, Perry J.; Friedman, Nir; Amit, Ido; Regev, Aviv (2014). High-resolution sequencing and modeling identifies distinct dynamic RNA regulatory strategies. Cell, 159(7), 1698-710.

Habazettl, Judith; Allan, Martin; Jensen, Pernille Rose; Sass, Hans-Jürgen; Thompson, Charles J; Grzesiek, Stephan (2014). Structural basis and dynamics of multidrug recognition in a minimal bacterial multidrug resistance system. Proceedings of the National Academy of Sciences of the United States of America, 111(51), E5498-507.

Bauer, Roman; Zubler, Frédéric; Pfister, Sabina; Hauri, Andreas; Pfeiffer, Michael; Muir, Dylan R.; Douglas, Rodney J. (2014). Developmental self-construction and -configuration of functional neocortical neuronal networks. PLoS Computational Biology, 10(12), e1003994.

Bukhari, Habib S. T.; Jakob, Roman P.; Maier, Timm (2014). Evolutionary origins of the multienzyme architecture of giant fungal Fatty Acid synthase. Structure, 22(12), 1775-1785.

Siamer, Sabrina; Dehio, Christoph (2014). New insights into the role of Bartonella effector proteins in pathogenesis. Current Opinion in Microbiology, 23, 80-5.

Drawnel, Faye M; Boccardo, Stefano; Prummer, Michael; Delobel, Frédéric; Graff, Alexandra; Weber, Michael; Gérard, Régine; Badi, Laura; Kam-Thong, Tony; Bu, Lei; Jiang, Xin; Hoflack, Jean-Christophe; Kiialainen, Anna; Jeworutzki, Elena; Aoyama, Natsuyo; Carlson, Coby; Burcin, Mark; Gromo, Gianni; Boehringer, Markus; Stahlberg, Henning; Hall, Benjamin J; Magnone, Maria Chiara; Kolaja, Kyle; Chien, Kenneth R; Bailly, Jacques; Iacone, Roberto (2014). Disease Modeling and Phenotypic Drug Screening for Diabetic Cardiomyopathy using Human Induced Pluripotent Stem Cells. Cell reports, 9(3), 810-21.

Clément-Ziza, Mathieu; Marsellach, Francesc X; Codlin, Sandra; Papadakis, Manos A; Reinhardt, Susanne; Rodríguez-López, María; Martin, Stuart; Marguerat, Samuel; Schmidt, Alexander; Lee, Eunhye; Workman, Christopher T; Bähler, Jürg; Beyer, Andreas (2014). Natural genetic variation impacts expression levels of coding, non-coding, and antisense transcripts in fission yeast. Molecular systems biology, 10(11), 764.

Brauchle, Michael; Hansen, Simon; Caussinus, Emmanuel; Lenard, Anna; Ochoa-Espinosa, Amanda; Scholz, Oliver; Sprecher, Simon G; Plückthun, Andreas; Affolter, Markus (2014). Protein interference applications in cellular and developmental biology using DARPins that recognize GFP and mCherry. Biology open, 3(12), 1252-61.

Gruber, Andreas R.; Martin, Georges; Müller, Philipp; Schmidt, Alexander; Gruber, Andreas J.; Gumienny, Rafal; Mittal, Nitish; Jayachandran, Rajesh; Pieters, Jean; Keller, Walter; van Nimwegen, Erik; Zavolan, Mihaela (2014). Global 3' UTR shortening has a limited effect on protein abundance in proliferating T cells. Nature Communications, 5(5465), 5465.

Akay, Turgay; Tourtellotte, Warren G; Arber, Silvia; Jessell, Thomas M (2014). Degradation of mouse locomotor pattern in the absence of proprioceptive sensory feedback.. Proceedings of the National Academy of Sciences of the United States of America, 111(47), 16877-82.

Neher, Richard A.; Russell, Colin A.; Shraiman, Boris I. (2014). Predicting evolution from the shape of genealogical trees. eLife, 3, 18.

Lamley, Jonathan M; Iuga, Dinu; Öster, Carl; Sass, Hans-Juergen; Rogowski, Marco; Oss, Andres; Past, Jaan; Reinhold, Andres; Grzesiek, Stephan; Samoson, Ago; Lewandowski, Józef R (2014). Solid-state NMR of a protein in a precipitated complex with a full-length antibody. Journal of the American Chemical Society, 136(48), 16800-6.

Sauteur, Loïc; Krudewig, Alice; Herwig, Lukas; Ehrenfeuchter, Nikolaus; Lenard, Anna; Affolter, Markus; Belting, Heinz-Georg (2014). Cdh5/VE-cadherin Promotes Endothelial Cell Interface Elongation via Cortical Actin Polymerization during Angiogenic Sprouting. Cell reports, 9(2), 504-13.

Jiang, Yanrui; Reichert, Heinrich (2014). Maintaining neural stem cell identity in the brain. eLife, 3, e5000.

Munoz-Robles, Victor; Dürrenberger, Marc; Tillmann, Heinisch; Lledos, Agustí; Schirmer, Tilman; Ward, Thomas R.; Maréchal, Jean-Didier (2014). Structural, Kinetic, and Docking Studies of Artificial Imine Reductases Based on Biotin-Streptavidin Technology: An Induced Lock-and-Key Hypothesis. Journal of the American Chemical Society, 136(44), 15676-83.

Bonde, Marie Mi; Voegeli, Sylvia; Baudrimont, Antoine; Séraphin, Bertrand; Becskei, Attila (2014). Quantification of pre-mRNA escape rate and synergy in splicing. Nucleic acids research, 42(20), 12847-60.

BoseDasgupta, Somdeb; Pieters, Jean (2014). Striking the Right Balance Determines TB or Not TB. Frontiers in immunology, 5, 455.

Bauer, Manuel; Ahrné, Erik; Baron, Anna P; Glatter, Timo; Fava, Luca L; Santamaria, Anna; Nigg, Erich A; Schmidt, Alexander (2014). Evaluation of data-dependent and -independent mass spectrometric workflows for sensitive quantification of proteins and phosphorylation sites. Journal of proteome research, 13(12), 5973-88.

Bailly, Xavier; Laguerre, Laurent; Correc, Gaelle; Dupont, Sam; Kurth, Thomas; Pfannkuchen, Anja; Entzeroth, Rolf; Probert, Ian; Vinogradov, Serge; Lechauve, Christophe; Garet-Delmas, Marie-Jose; Reichert, Heinrich; Hartenstein, Volker (2014). The chimerical and multifaceted marine acoel Symsagittifera roscoffensis : from photosymbiosis to brain regeneration. Frontiers in microbiology, 5, 498.

Fastenrath, Matthias; Coynel, David; Spalek, Klara; Milnik, Annette; Gschwind, Leo; Roozendaal, Benno; Papassotiropoulos, Andreas; de Quervain, Dominique J. F. (2014). Dynamic modulation of amygdala-hippocampal connectivity by emotional arousal. Journal of Neuroscience, 34(42), 13935-47.

Norrmén, C.; Figlia, G.; Lebrun-Julien, F.; Pereira, J. A.; Trötzmüller, M.; Köfeler, H. C.; Rantanen, V.; Wessig, C.; van Deijk, A. F.; Smit, A. B.; Verheijen, M. G.; Rüegg, M. A.; Hall, M. N.; Suter, U. (2014). mTORC1 Controls PNS Myelination along the mTORC1-RXRγ-SREBP-Lipid Biosynthesis Axis in Schwann Cells. Cell Reports, 9(2), 646-660.

Luo, Jinghui; Wärmländer, Sebastian K. T. S.; Gräslund, Astrid; Abrahams, Jan Pieter (2014). Alzheimer Peptides Aggregate into Transient Nanoglobules That Nucleate Fibrils. Biochemistry, 53(40), 6302-8.

Schönemann, Lars; Kühn, Uwe; Martin, Georges; Schäfer, Peter; Gruber, Andreas R; Keller, Walter; Zavolan, Mihaela; Wahle, Elmar (2014). Reconstitution of CPSF active in polyadenylation: recognition of the polyadenylation signal by WDR33. Genes & development, 28(21), 2381-93.

Santos, M. Emília; Braasch, Ingo; Boileau, Nicolas; Meyer, Britta S.; Sauteur, Loïc; Böhne, Astrid; Belting, Heinz-Georg; Affolter, Markus; Salzburger, Walter (2014). The evolution of cichlid fish egg-spots is linked with a cis-regulatory change. Nature Communications, 5, 5149.

Schreiner, Dietmar; Nguyen, Thi-Minh; Russo, Giancarlo; Heber, Steffen; Patrignani, Andrea; Ahrné, Erik; Scheiffele, Peter (2014). Targeted combinatorial alternative splicing generates brain region-specific repertoires of neurexins. Neuron, 84(2), 386-98.

Solinger, J. A.; Spang, A. (2014). Loss of the Sec1/Munc18-family proteins VPS-33.2 and VPS-33.1 bypasses a block in endosome maturation in Caenorhabditis elegans. Molecular Biology of the Cell, 25(24), 3909-3925.

Luo, Jinghui; Wärmländer, Sebastian K. T. S.; Gräslund, Astrid; Abrahams, Jan Pieter (2014). Non-chaperone Proteins Can Inhibit Aggregation and Cytotoxicity of Alzheimer Amyloid beta Peptide. Journal of Biological Chemistry, 289(40), 27766-75.

Roubinet, Chantal; Cabernard, Clemens (2014). Control of asymmetric cell division. Current opinion in cell biology, 31, 84-91.

Pecka, Michael; Han, Yunyun; Sader, Elie; Mrsic-Flogel, Thomas D (2014). Experience-dependent specialization of receptive field surround for selective coding of natural scenes. Neuron, 84(2), 457-69.

Moscoso, Joana A.; Jaeger, Tina; Valentini, Martina; Hui, Kailyn; Jenal, Urs; Filloux, Alain (2014). The Diguanylate Cyclase SadC Is a Central Player in Gac/Rsm-Mediated Biofilm Formation in Pseudomonas aeruginosa. Journal of Bacteriology, 196(23), 4081-4088.

BoseDasgupta, Somdeb; Pieters, Jean (2014). Coronin 1 trimerization is essential to protect pathogenic mycobacteria within macrophages from lysosomal delivery. FEBS letters, 588(21), 3898-905.

De Smet, Frederik; Tembuyser, Bieke; Lenard, Anna; Claes, Filip; Zhang, Jie; Michielsen, Christof; Van Schepdael, Ann; Herbert, Jean-Marc; Bono, Françoise; Affolter, Markus; Dewerchin, Mieke; Carmeliet, Peter (2014). Fibroblast Growth Factor Signaling Affects Vascular Outgrowth and Is Required for the Maintenance of Blood Vessel Integrity. Chemistry & biology, 21(10), 1310-1317.

Stanger, Frédéric V.; Dehio, Christoph; Schirmer, Tilman (2014). Structure of the N-terminal gyrase B fragment in complex with ADP⋅Pi reveals rigid-body motion induced by ATP hydrolysis. PLoS ONE, 9(9), e107289.

Ackema, K. B.; Hench, J.; Böckler, S.; Wang, S. C.; Sauder, U.; Mergentaler, H.; Westermann, B.; Bard, F.; Frank, S.; Spang, A. (2014). The small GTPase Arf1 modulates mitochondrial morphology and function. The EMBO Journal, 33(22), 2659-2675.

Ozaki, Shogo; Schalch-Moser, Annina; Zumthor, Ludwig; Manfredi, Pablo; Ebbensgaard, Anna; Schirmer, Tilman; Jenal, Urs (2014). Activation and polar sequestration of PopA, a c-di-GMP effector protein involved in Caulobacter crescentus cell cycle control. Molecular Microbiology, 94(3), 580-94.

Kleinert, Maximilian; Sylow, Lykke; Fazakerley, Daniel J.; Krycer, James R.; Thomas, Kristen C.; Oxbøll, Anne-Julie; Jordy, Andreas B.; Jensen, Thomas E.; Yang, Guang; Schjerling, Peter; Kiens, Bente; James, David E.; Ruegg, Markus A.; Richter, Erik A. (2014). Acute mTOR inhibition induces insulin resistance and alters substrate utilization in vivo. Molecular Metabolism, 3(6), 630-41.

Bumann, Dirk (2014). Identification of protective antigens for vaccination against systemic salmonellosis. Frontiers in Immunology, 5(381), 381.

Gunage, Rajesh D; Reichert, Heinrich; VijayRaghavan, K (2014). Identification of a new stem cell population which generates Drosophila flight muscles. eLife, 3, e03126.

von Burg, Nicole; Chappaz, Stéphane; Baerenwaldt, Anne; Horvath, Edit; Bose Dasgupta, Somdeb; Ashok, Devika; Pieters, Jean; Tacchini-Cottier, Fabienne; Rolink, Antonius; Acha-Orbea, Hans; Finke, Daniela (2014). Activated group 3 innate lymphoid cells promote T-cell-mediated immune responses. Proceedings of the National Academy of Sciences, 111(35), 12835-40.

Arnoldini, Markus; Vizcarra, Ima Avalos; Peña-Miller, Rafael; Stocker, Nicolas; Diard, Médéric; Vogel, Viola; Beardmore, Robert E.; Hardt, Wolf-Dietrich; Ackermann, Martin (2014). Bistable expression of virulence genes in salmonella leads to the formation of an antibiotic-tolerant subpopulation. PLoS Biology, 12(8), e1001928.

Diard, Médéric; Sellin, Mikael E.; Dolowschiak, Tamas; Arnoldini, Markus; Ackermann, Martin; Hardt, Wolf-Dietrich (2014). Antibiotic treatment selects for cooperative virulence of Salmonella typhimurium. Current Biology, 24(17), 2000-2005.

Claudi, Beatrice; Spröte, Petra; Chirkova, Anna; Personnic, Nicolas; Zankl, Janine; Schürmann, Nura; Schmidt, Alexander; Bumann, Dirk (2014). Phenotypic variation of salmonella in host tissues delays eradication by antimicrobial chemotherapy. Cell, 158(4), 722-733.

Hodel, Corinne; Niklaus, Stephanie; Heidemann, Martina; Klooster, Jan; Kamermans, Maarten; Biehlmaier, Oliver; Gesemann, Matthias; Neuhauss, Stephan C. F. (2014). Myosin VIIA is a marker for the cone accessory outer segment in zebrafish. Anatomical Record, Part A, 297(9), 1777-84.

Broz, Petr (2014). Getting rid of the bad apple : inflammasome-induced extrusion of salmonella-infected enterocytes. Cell host & microbe, 16(2), 153-5.

Hassaine, Ghérici; Deluz, Cédric; Grasso, Luigino; Wyss, Romain; Tol, Menno B; Hovius, Ruud; Graff, Alexandra; Stahlberg, Henning; Tomizaki, Takashi; Desmyter, Aline; Moreau, Christophe; Li, Xiao-Dan; Poitevin, Frédéric; Vogel, Horst; Nury, Hugues (2014). X-ray structure of the mouse serotonin 5-HT3 receptor. Nature, 512(7514), 276-81.

Sellin, Mikael E.; Müller, Anna A.; Felmy, Boas; Dolowschiak, Tamas; Diard, Médéric; Tardivel, Aubry; Maslowski, Kendle M.; Hardt, Wolf-Dietrich (2014). Epithelium-intrinsic NAIP/NLRC4 inflammasome drives infected enterocyte expulsion to restrict Salmonella replication in the intestinal mucosa. Cell Host & Microbe, 16(2), 237-248.

Reichert, Heinrich (2014). Insights into brain development and disease from neurogenetic analyses in Drosophila melanogaster. Journal of biosciences, 39(4), 595-603.

Handschin, Christoph (2014). The coactivator PGC-1α regulates skeletal muscle oxidative metabolism independently of the nuclear receptor PPARβ/δ in sedentary mice fed a regular chow diet. Diabetologia, 57, no. 11(11), 2405-2412.

Felser, Andrea; Lindinger, Peter W; Schnell, Dominik; Kratschmar, Denise V; Odermatt, Alex; Mies, Suzette; Jenö, Paul; Krähenbühl, Stephan (2014). Hepatocellular toxicity of benzbromarone : Effects on mitochondrial function and structure. Toxicology, 324, 136-46.

Steiner, Esther; Enzmann, Gaby U.; Lyck, Ruth; Lin, Shuo; Rüegg, Markus A.; Kröger, Stephan; Engelhardt, Britta (2014). The heparan sulfate proteoglycan agrin contributes to barrier properties of mouse brain endothelial cells by stabilizing adherens junctions. Cell and Tissue Research, 358(2), 465-479.

Silva-Vargas, Violeta; Doetsch, Fiona (2014). A new twist for neurotrophins : endothelial-derived NT-3 mediates adult neural stem cell quiescence. Neuron, 83(3), 507-509.

Affolter, Markus; Wüthrich, Kurt (2014). Walter Jakob Gehring: a Master of Developmental Biology. Proceedings of the National Academy of Sciences of the United States of America, 111(35), 12574-5.

Schier, Alexander F. (2014). Obituary: Walter J. Gehring (1939-2014). Development, 141(17), 3289-91.

Cornu, M.; Oppliger, W.; Albert, V.; Robitaille, A. M.; Trapani, F.; Quagliata, L.; Fuhrer, T.; Sauer, U.; Terracciano, L.; Hall, M. N. (2014). Hepatic mTORC1 controls locomotor activity, body temperature, and lipid metabolism through FGF21. Proceedings of the National Academy of Sciences of the United States of America, 111(32), 11592-11599.

Vukojevic, Vanja; Kolassa, Iris-T.; Fastenrath, Matthias; Gschwind, Leo; Spalek, Klara; Milnik, Annette; Heck, Angela; Vogler, Christian; Wilker, Sarah; Demougin, Philippe; Peter, Fabian; Atucha, Erika; Stetak, Attila; Roozendaal, Benno; Elbert, Thomas; Papassotiropoulos, Andreas; de Quervain, Dominique J.-F. (2014). Epigenetic modification of the glucocorticoid receptor gene is linked to traumatic memory and post-traumatic stress disorder risk in genocide survivors. Journal of Neuroscience, 34(31), 10274-84.

Flici, Hakima; Cattenoz, Pierre B; Komonyi, Orban; Laneve, Pietro; Erkosar, Berra; Karatas, Omer F; Reichert, Heinrich; Berzsenyi, Sara; Giangrande, Angela (2014). Interlocked loops trigger lineage specification and stable fates in the Drosophila nervous system.. Nature communications, 5, 4484.

Affolter, Markus; Müller, Martin (2014). Walter Jakob Gehring (1939-2014). Developmental Cell, 30(2), 120-2.

Stracka, D.; Jozefczuk, S.; Rudroff, F.; Sauer, U.; Hall, M. N. (2014). Nitrogen Source Activates TOR (Target of Rapamycin) Complex 1 via Glutamine and Independently of Gtr/Rag Proteins. Journal of Biological Chemistry, 289(36), 25010-25020.

Arquint, Christian; Gabryjonczyk, Anna-Maria; Nigg, Erich A. (2014). Centrosomes as signalling centres. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 369(1650), 12.

Gruber, Andreas J.; Grandy, William A.; Balwierz, Piotr J.; Dimitrova, Yoana A.; Pachkov, Mikhail; Ciaudo, Constance; van Nimwegen, Erik; Zavolan, Mihaela (2014). Embryonic stem cell-specific microRNAs contribute to pluripotency by inhibiting regulators of multiple differentiation pathways. Nucleic Acids Research, 42(14), 9313-26.

Ko, Ho; Mrsic-Flogel, Thomas D.; Hofer, Sonja B. (2014). Emergence of feature-specific connectivity in cortical microcircuits in the absence of visual experience.. Journal of Neuroscience, 34(29), 9812-6.

Richter, Constance; Woods, Ian G.; Schier, Alexander F. (2014). Neuropeptidergic control of sleep and wakefulness. Annual Review of Neuroscience, 37, 503-31.

Hausser, Jean; Zavolan, Mihaela (2014). Identification and consequences of miRNA-target interactions - beyond repression of gene expression. Nature reviews. Genetics, 15(9), 599-612.

Perez, Camilo; Faust, Belinda; Mehdipour, Ahmad Reza; Francesconi, Kevin A.; Forrest, Lucy R.; Ziegler, Christine (2014). Substrate-bound outward-open state of the betaine transporter BetP provides insights into Na+ coupling. Nature Communications, 5, 4231.

Pecho-Vrieseling, Eline; Rieker, Claus; Fuchs, Sascha; Bleckmann, Dorothee; Esposito, Maria Soledad; Botta, Paolo; Goldstein, Chris; Bernhard, Mario; Galimberti, Ivan; Müller, Matthias; Lüthi, Andreas; Arber, Silvia; Bouwmeester, Tewis; van der Putten, Herman; Di Giorgio, Francesco Paolo (2014). Transneuronal propagation of mutant huntingtin contributes to non-cell autonomous pathology in neurons. Nature neuroscience, 17(8), 1064-72.

Zolnerciks, Joseph K.; Akkaya, Begum G.; Snippe, Marjolein; Chiba, Peter; Seelig, Anna; Linton, Kenneth J. (2014). The Q loops of the human multidrug resistance transporter ABCB1 are necessary to couple drug binding to the ATP catalytic cycle.. FASEB Journal, 28(10), 4335-4346.

Zhang, L.; Tschumi, B. O.; Corgnac, S.; Rüegg, M. A.; Hall, M. N.; Mach, J.-P.; Romero, P.; Donda, A. (2014). Mammalian target of rapamycin complex 1 orchestrates invariant NKT cell differentiation and effector function. Journal of Immunology, 193(4), 1759-1765.

Shimmi, Osamu; Matsuda, Shinya; Hatakeyama, Masatsugu (2014). Insights into the molecular mechanisms underlying diversified wing venation among insects. Proceedings of the Royal Society. Series B, Biological Sciences, 281(1789), 20140264.

Sen, Sonia; Biagini, Silvia; Reichert, Heinrich; VijayRaghavan, K (2014). Orthodenticle is required for the development of olfactory projection neurons and local interneurons in Drosophila. Biology open, 3(8), 711-7.

Fengos, Georgios; Schmidt, Alexander; Martin, Katrin; Fluri, Erika; Aebersold, Ruedi; Iber, Dagmar; Pertz, Olivier (2014). Spatial proteomic and phospho-proteomic organization in three prototypical cell migration modes. Proteome science, 12, 23.

Čajánek, Lukáš; Nigg, Erich A (2014). Cep164 triggers ciliogenesis by recruiting Tau tubulin kinase 2 to the mother centriole. Proceedings of the National Academy of Sciences of the United States of America, 111(28), E2841-50.

Chou, Po-Chien; Oh, Won Jun; Wu, Chang-Chih; Moloughney, Joseph; Rüegg, Markus A.; Hall, Michael N.; Jacinto, Estela; Werlen, Guy (2014). Mammalian target of rapamycin complex 2 modulates αβTCR processing and surface expression during thymocyte development. Journal of Immunology, 193(3), 1162-70.

Kentner, David; Martano, Giuseppe; Callon, Morgane; Chiquet, Petra; Brodmann, Maj; Burton, Olga; Wahlander, Asa; Nanni, Paolo; Delmotte, Nathanaël; Grossmann, Jonas; Limenitakis, Julien; Schlapbach, Ralph; Kiefer, Patrick; Vorholt, Julia A.; Hiller, Sebastian; Bumann, Dirk (2014). Shigella reroutes host cell central metabolism to obtain high-flux nutrient supply for vigorous intracellular growth. Proceedings of the National Academy of Sciences of the United States of America, 111(27), 9929-34.

Grahammer, F.; Haenisch, N.; Steinhardt, F.; Sander, L.; Roerden, M.; Arnold, F.; Cordts, T.; Wanner, N.; Reichardt, W.; Kerjaschki, D.; Ruegg, M. A.; Hall, M. N.; Moulin, P.; Busch, H.; Boerries, M.; Walz, G.; Artunc, F.; Huber, T. B. (2014). mTORC1 maintains renal tubular homeostasis and is essential in response to ischemic stress. Proceedings of the National Academy of Sciences of the United States of America, 111(27), E2817-26.

Hasegawa, Yuki; Tang, Dave; Takahashi, Naoko; Hayashizaki, Yoshihide; Forrest, Alistair R. R.; Fantom Consortium; Suzuki, Harukazu (2014). CCL2 enhances pluripotency of human induced pluripotent stem cells by activating hypoxia related genes. Scientific Reports, 4, 5228.

Cabernard, Clemens (2014). The Centriolar Protein Bld10/Cep135 Is Required to Establish Centrosome Asymmetry in Drosophila Neuroblasts. Current biology, 24(13), 1548-1555.

Nigg, Erich A.; Cajanek, Lukas; Arquint, Christian (2014). The centrosome duplication cycle in health and disease. FEBS letters, 588(15), 2366-2372.

Solinger, J. A.; Poteryaev, D.; Spang, A. (2014). Application of RNAi Technology and Fluorescent Protein Markers to Study Membrane Traffic in C. elegans. Methods in Molecular Biology, 1174, 329-47.

de Cabo, R.; Carmona-Gutierrez, D.; Bernier, M.; Hall, M. N.; Madeo, F. (2014). The Search for Antiaging Interventions : From Elixirs to Fasting Regimens. Cell, 157(7), 1515-1526.

Lebrun-Julien, F.; Bachmann, L.; Norrmén, C.; Trötzmüller, M.; Köfeler, H.; Rüegg, M. A.; Hall, M. N.; Suter, U. (2014). Balanced mTORC1 activity in oligodendrocytes is required for accurate CNS myelination. Journal of Neuroscience, 34(25), 8432-8448.

Fei, Na; Häussinger, Daniel; Blümli, Seraina; Laventie, Benoît-Joseph; Bizzini, Lorenzo D; Zimmermann, Kaspar; Jenal, Urs; Gillingham, Dennis (2014). Catalytic carbene transfer allows the direct customization of cyclic purine dinucleotides.. Chemical Communications, 50(62), 8499-502.

Wilker, Sarah; Elbert, Thomas; Papassotiropoulos, Andreas; de Quervain, Dominique J. -F.; Kolassa, Iris-Tatjana (2014). Responce to: Further Support for an Association between the Memory-Related Gene WWC1 and Posttraumatic Stress Disorder: Results from the Detroit Neighborhood Health Study. Biological psychiatry, 76(11), E27-E28.

Kudryashev, Misha; Aktoudianaki, Aikaterini; Dedoglou, Dimitrios; Stahlberg, Henning; Tsiotis, Georgios (2014). The ultrastructure of Chlorobaculum tepidum revealed by cryo-electron tomography. Biochimica et biophysica acta, 1837(10), 1635-1642.

Luo, Jinghui; Wärmländer, Sebastian K. T. S.; Chien-Hung, Yu; Muhammad, Kamran; Gräslund, Astrid; Abrahams, Jan Pieter (2014). The Aβ peptide forms non-amyloid fibrils in the presence of carbon nanotubes. Nanoscale, 6(12), 6720-6.

Okujava, Rusudan; Guye, Patrick; Lu, Yun-Yueh; Mistl, Claudia; Polus, Florine; Vayssier-Taussat, Muriel; Halin, Cornelia; Rolink, Antonius G.; Dehio, Christoph (2014). A translocated effector required for bartonella dissemination from derma to blood safeguards migratory host cells from damage by co-translocated effectors. PLoS Pathogens, 10(6)

Fumeaux, Coralie; Radhakrishnan, Sunish Kumar; Ardissone, Silvia; Théraulaz, Laurence; Frandi, Antonio; Martins, Daniel; Nesper, Jutta; Abel, Sören; Jenal, Urs; Viollier, Patrick H. (2014). Cell cycle transition from S-phase to G1 in Caulobacter is mediated by ancestral virulence regulators. Nature Communications, 5, 4081.

Lepore, Marco; de Lalla, Claudia; Gundimeda, S. Ramanjaneyulu; Gsellinger, Heiko; Consonni, Michela; Garavaglia, Claudio; Sansano, Sebastiano; Piccolo, Francesco; Scelfo, Andrea; Häussinger, Daniel; Montagna, Daniela; Locatelli, Franco; Bonini, Chiara; Bondanza, Attilio; Forcina, Alessandra; Li, Zhiyuan; Ni, Guanghui; Ciceri, Fabio; Jenö, Paul; Xia, Chengfeng; Mori, Lucia; Dellabona, Paolo; Casorati, Giulia; De Libero, Gennaro (2014). A novel self-lipid antigen targets human T cells against CD1c(+) leukemias. Journal of Experimental Medicine, 211(7), 1360-1374.

Hutter, C. A. J.; Lehner, R.; Wirth, Ch.; Condemine, G.; Peneff, C.; Schirmer, T. (2014). Structure of the oligogalacturonate-specific KdgM porin. Acta Crystallographica Section D: Biological Crystallography, 70(Pt 6), 1770-8.

Baresic, Mario; Salatino, Silvia; Kupr, Barbara; van Nimwegen, Erik; Handschin, Christoph (2014). Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1α in the regulation of the hypoxic gene program. Molecular and cellular biology, 34(16), 2996-3012.

Kowal, Justyna Ł; Kowal, Julia K.; Wu, Dalin; Stahlberg, Henning; Palivan, Cornelia G.; Meier, Wolfgang P. (2014). Functional surface engineering by nucleotide-modulated potassium channel insertion into polymer membranes attached to solid supports. Biomaterials, 35(26), 7286-94.

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Balwierz, Piotr J; Pachkov, Mikhail; Arnold, Phil; Gruber, Andreas J; Zavolan, Mihaela; van Nimwegen, Erik (2014). ISMARA: Automated modeling of genomic signals as a democracy of regulatory motifs. Genome research, 24(5), 869-84.

McCoy, Jason G.; Rusinova, Radda; Kim, Dorothy M.; Kowal, Julia; Banerjee, Sourabh; Jaramillo Cartagena, Alexis; Thompson, Ameer N.; Kolmakova-Partensky, Ludmila; Stahlberg, Henning; Andersen, Olaf S.; Nimigean, Crina M. (2014). A KcsA/MloK1 chimeric ion channel has lipid-dependent ligand-binding energetics. Journal of biological chemistry, 289(14), 9535-9546.

Blank, Diana; Wolf, Luise; Ackermann, Martin; Silander, Olin K. (2014). The predictability of molecular evolution during functional innovation. Proceedings of the National Academy of Sciences, 111(8), 3044-3049.

O'Donnell, Hope; Pham, Oanh H; Li, Lin-xi; Atif, Shaikh M; Lee, Seung-Joo; Ravesloot, Marietta M; Stolfi, Jessica L; Nuccio, Sean-Paul; Broz, Petr; Monack, Denise M; Baumler, Andreas J; McSorley, Stephen J (2014). Toll-like Receptor and Inflammasome Signals Converge to Amplify the Innate Bactericidal Capacity of T Helper 1 Cells. Immunity, 40(2), 213-24.

Chen, J.; Tu, X.; Esen, E.; Joeng, K. S.; Lin, C.; Arbeit, J. M.; Rüegg, M. A.; Hall, M. N.; Ma, L.; Long, F. (2014). WNT7B promotes bone formation in part through mTORC1. PLoS Genetics, 10(1), e1004145.

Nigg, Erich A. (2014). STIL Microcephaly Mutations Interfere with APC/C-Mediated Degradation and Cause Centriole Amplification. Current biology, 24(4), 351-60.

Esposito, Maria Soledad; Capelli, Paolo; Arber, Silvia (2014). Brainstem nucleus MdV mediates skilled forelimb motor tasks. Nature, 508(7496), 351-6.

Pivetta, Chiara; Esposito, Maria Soledad; Sigrist, Markus; Arber, Silvia (2014). Motor-circuit communication matrix from spinal cord to brainstem neurons revealed by developmental origin. Cell, 156(3), 537-48.

Stekhoven, Daniel J.; Omasits, Ulrich; Quebatte, Maxime; Dehio, Christoph; Ahrens, Christian H. (2014). Proteome-wide identification of predominant subcellular protein localizations in a bacterial model organism. Journal of Proteomics, 99, 123-37.

Denoth Lippuner, Annina; Julou, Thomas; Barral, Yves (2014). Budding yeast as a model organism to study the effects of age. FEMS microbiology reviews, 38(2), 300-25.

Creed, Meaghan C.; Ntamati, Niels R.; Tan, Kelly R. (2014). VTA GABA neurons modulate specific learning behaviors through the control of dopamine and cholinergic systems. Frontiers in Behavioral Neuroscience, 8, 8.

Iijima, Takatoshi; Iijima, Yoko; Witte, Harald; Scheiffele, Peter (2014). Neuronal cell type-specific alternative splicing is regulated by the KH domain protein SLM1. Journal of cell biology, 204(3), 331-42.

Schwan, Carsten; Kruppke, Anna S; Nölke, Thilo; Schumacher, Lucas; Koch-Nolte, Friedrich; Kudryashev, Mikhail; Stahlberg, Henning; Aktories, Klaus (2014). Clostridium difficile toxin CDT hijacks microtubule organization and reroutes vesicle traffic to increase pathogen adherence. Proceedings of the National Academy of Sciences of the United States of America, 111(6), 2313-8.

Kowal, Julia; Chami, Mohamed; Baumgartner, Paul; Arheit, Marcel; Chiu, Po-Lin; Rangl, Martina; Scheuring, Simon; Schröder, Gunnar F; Nimigean, Crina M; Stahlberg, Henning (2014). Ligand-induced structural changes in the cyclic nucleotide-modulated potassium channel MloK1. Nature communications, 5, 3106.

Luisier, Raphaëlle; Unterberger, Elif B.; Goodman, Jay I.; Schwarz, Michael; Moggs, Jonathan; Terranova, Rémi; van Nimwegen, Erik (2014). Computational modeling identifies key gene regulatory interactions underlying phenobarbital-mediated tumor promotion. Nucleic Acids Research, 42(7), 4180-95.

Mittal, Nitish; Zavolan, Mihaela (2014). Seq and CLIP through the miRNA world. Genome biology, 15(1), 202.

Sundriyal, Amit; Massa, Claudia; Samoray, Dietrich; Zehender, Fabian; Sharpe, Timothy; Jenal, Urs; Schirmer, Tilman (2014). Inherent regulation of EAL domain-catalyzed hydrolysis of second messenger c-di-GMP. Journal of Biological Chemistry, 289(10), 6978-90.

Rödelsperger, Christian; Neher, Richard A.; Weller, Andreas M.; Eberhardt, Gabi; Witte, Hanh; Mayer, Werner E.; Dieterich, Christoph; Sommer, Ralf J. (2014). Characterization of genetic diversity in the nematode Pristionchus pacificus from population-scale resequencing data. Genetics, 196(4), 1153-65.

Kleijer, Kristel T E; Schmeisser, Michael J; Krueger, Dilja D; Boeckers, Tobias M; Scheiffele, Peter; Bourgeron, Thomas; Brose, Nils; Burbach, J Peter H (2014). Neurobiology of autism gene products : towards pathogenesis and drug targets. Psychopharmacology, 231(6), 1037-62.

Abad, Maria Alba; Medina, Bethan; Santamaria, Anna; Zou, Juan; Plasberg-Hill, Carla; Madhumalar, Arumugam; Jayachandran, Uma; Redli, Patrick Marc; Rappsilber, Juri; Nigg, Erich A; Jeyaprakash, A Arockia (2014). Structural basis for microtubule recognition by the human kinetochore Ska complex. Nature communications, 5, 2964.

Pauli, Andrea; Norris, Megan L.; Valen, Eivind; Chew, Guo-Liang; Gagnon, James A.; Zimmerman, Steven; Mitchell, Andrew; Ma, Jiao; Dubrulle, Julien; Reyon, Deepak; Tsai, Shengdar Q.; Joung, J. Keith; Saghatelian, Alan; Schier, Alexander F. (2014). Toddler: an embryonic signal that promotes cell movement via Apelin receptors. Science, 343(6172), 1248636.

Luksys, Gediminas; Ackermann, Sandra; Coynel, David; Fastenrath, Matthias; Gschwind, Leo; Heck, Angela; Rasch, Bjoern; Spalek, Klara; Vogler, Christian; Papassotiropoulos, Andreas; de Quervain, Dominique (2014). BAIAP2 is related to emotional modulation of human memory strength. PLoS ONE, 9(1), e83707.

Scherer, Sebastian; Arheit, Marcel; Kowal, Julia; Zeng, Xiangyan; Stahlberg, Henning (2014). Single Particle 3D Reconstruction for 2D Crystal Images of Membrane Proteins. Journal of Structural Biology, 185(3), 267-77.

Vigano, Maria Alessandra; Ivanek, Robert; Balwierz, Piotr; Berninger, Philipp; van Nimwegen, Erik; Karjalainen, Klaus; Rolink, Antonius (2014). An epigenetic profile of early T-cell development from multipotent progenitors to committed T-cell descendants.. European journal of immunology, 44(4), 1181-93.

Jorjani, Hadi; Zavolan, Mihaela (2014). TSSer: an automated method to identify transcription start sites in prokaryotic genomes from differential RNA sequencing data. Bioinformatics, 30(7), 971-4.

Goldie, Kenneth N.; Abeyrathne, Priyanka; Kebbel, Fabian; Chami, Mohamed; Ringler, Philippe; Stahlberg, Henning (2014). Cryo-electron Microscopy of Membrane Proteins. Methods in Molecular Biology, 1117, 325-41.

Moult, John; Fidelis, Krzysztof; Kryshtafovych, Andriy; Schwede, Torsten; Tramontano, Anna (2014). Critical assessment of methods of protein structure prediction (CASP) - round X. Proteins, 82 Suppl 2(S2), 1-6.

Kanca, Oguz; Caussinus, Emmanuel; Denes, Alexandru S; Percival-Smith, Anthony; Affolter, Markus (2014). Raeppli: a whole-tissue labeling tool for live imaging of Drosophila development. Development, 141(2), 472-80.

Morand, Réjane; Bouitbir, Jamal; Felser, Andrea; Hench, Jürgen; Handschin, Christoph; Frank, Stephan; Krähenbühl, Stephan (2014). Effect of carnitine, acetyl-, and propionylcarnitine supplementation on the body carnitine pool, skeletal muscle composition, and physical performance in mice. European journal of nutrition, 53(6), 1313-25.

Kryshtafovych, Andriy; Moult, John; Bales, Patrick; Bazan, J. Fernando; Biasini, Marco; Burgin, Alex; Chen, Chen; Cochran, Frank V.; Craig, Timothy K.; Das, Rhiju; Fass, Deborah; Garcia-Doval, Carmela; Herzberg, Osnat; Lorimer, Donald; Luecke, Hartmut; Ma, Xiaolei; Nelson, Daniel C.; van Raaij, Mark J.; Rohwer, Forest; Segall, Anca; Seguritan, Victor; Zeth, Kornelius; Schwede, Torsten (2014). Challenging the state-of-the-art in protein structure prediction : highlights of experimental target structures for the 10(th) Critical Assessment of Techniques for Protein Structure Prediction Experiment CASP10. Proteins, 82(S2), 26-42.

Zhang, Yong; Vastenhouw, Nadine L.; Feng, Jianxing; Fu, Kai; Wang, Chenfei; Ge, Ying; Pauli, Andrea; van Hummelen, Paul; Schier, Alexander F.; Liu, X. Shirley (2014). Canonical nucleosome organization at promoters forms during genome activation. Genome Research, 24(2), 260-6.

Eisele, Petra S; Handschin, Christoph (2014). Functional crosstalk of PGC-1 coactivators and inflammation in skeletal muscle pathophysiology. Seminars in immunopathology, 36(1), 27-53.

Schmidt, Tobias; Bergner, Andreas; Schwede, Torsten (2014). Modelling three-dimensional protein structures for applications in drug design. Drug discovery today, 19(7), 890-7.

Kishore, Shivendra; Piscuoglio, Salvatore; Kovac, Michal; Gylling, Annette; Wenzel, Friedel; Trapani, Francesca; Altermatt, Hans Joerg; Mele, Valentina; Marra, Giancarlo; Peltomäki, Päivi; Terracciano, Luigi; Zavolan, Mihaela; Heinimann, Karl (2014). 3'UTR poly(T/U) tract deletions and altered expression of EWSR1 are a hallmark of mismatch repair deficient cancers. Cancer research, 74(1), 224-234.

Wyder Peters, L.; Molle, K. D.; Thiemeyer, A.; Knopf, A.; Goxe, M.; Guerry, P.; Brodbeck, D.; Colombi, M.; Hall, M. N.; Moroni, C.; Regenass, U. (2014). An Isogenic Cell Panel Identifies Compounds That Inhibit Proliferation of mTOR-Pathway Addicted Cells by Different Mechanisms. Journal of Biomolecular Screening, 19(1), 131-144.

Kryshtafovych, Andriy; Barbato, Alessandro; Fidelis, Krzysztof; Monastyrskyy, Bohdan; Schwede, Torsten; Tramontano, Anna (2014). Assessment of the assessment : evaluation of the model quality estimates in CASP10. Proteins, 82 Suppl 2(S2), 112-26.

Gehring, Walter J. (2014). The evolution of vision. WIREs Developmental Biology, 3(1), 1-40.

Bauer, Roman; Zubler, Frederic; Hauri, Andreas; Muir, Dylan R.; Douglas, Rodney J. (2014). Developmental origin of patchy axonal connectivity in the neocortex: a computational model. Cerebral Cortex, 24(2), 487-500.

Gallo Cassarino, Tiziano; Bordoli, Lorenza; Schwede, Torsten (2014). Assessment of ligand binding site predictions in CASP10.. Proteins, 82 Suppl 2(S2), 154-63.

Bosedasgupta, S.; Pieters, J. (2014). Inflammatory Stimuli Reprogram Macrophage Phagocytosis to Macropinocytosis for the Rapid Elimination of Pathogens. PLoS Pathogens, 10(1), e1003879.

Vinet, A.; Fieder, T.; Froquet, R.; Dardel, A.; Cosson, P.; Pieters, J. (2014). Initiation of multicellular differentiation in Dictyostelium discoideum regulated by coronin A. Molecular Biology of the Cell, 25(5), 688-701.

van der Woude, Aniek D; Stoop, Esther J M; Stiess, Michael; Wang, Sen; Ummels, Roy; van Stempvoort, Gunny; Piersma, Sander R; Cascioferro, Alessandro; Jiménez, Connie R; Houben, Edith N G; Luirink, Joen; Pieters, Jean; van der Sar, Astrid M; Bitter, Wilbert (2014). Analysis of SecA2-dependent substrates in Mycobacterium marinum identifies protein kinase G (PknG) as a virulence effector. Cellular microbiology, 16(2), 280-95.

Burton, Neil A.; Schürmann, Nura; Casse, Olivier; Steeb, Anne K.; Claudi, Beatrice; Zankl, Janine; Schmidt, Alexander; Bumann, Dirk (2014). Disparate Impact of Oxidative Host Defenses Determines the Fate of Salmonella during Systemic Infection in Mice. Cell Host & Microbe, 15(1), 72-83.

Maze, Alain; Glatter, Timo; Bumann, Dirk (2014). The central metabolism regulator EIIAGlc switches Salmonella from growth arrest to acute virulence through activation of virulence factor secretion. Cell reports, 7(5), 1426-1433.

Pantelic, Radosav S.; Fu, Wangyang; Schoenenberger, Christian; Stahlberg, Henning (2014). Rendering graphene supports hydrophilic with non-covalent aromatic functionalization for transmission electron microscopy. Applied physics letters, 104(13), 134103-134107.

Schleicher, Kai D; Dettmer, Simon L; Kapinos, Larisa E; Pagliara, Stefano; Keyser, Ulrich F; Jeney, Sylvia; Lim, Roderick Y H (2014). Selective transport control on molecular velcro made from intrinsically disordered proteins. Nature nanotechnology, 9(7), 525-30.

Zaehringer, Ulrich; Ittig, Simon; Lindner, Buko; Moll, Hermann; Schombel, Ursula; Gisch, Nicolas; Cornelis, Guy R. (2014). NMR Based Structural Analysis of the Complete Rough-type LPS Isolated From Capnocytophaga canimorsus. Journal of biological chemistry, 289(34), 23963-23976.

Studer, Gabriel; Biasini, Marco; Schwede, Torsten (2014). Assessing the local structural quality of transmembrane protein models using statistical potentials (QMEANBrane). Bioinformatics, 30(17), i505-11.

Gruber, Andreas R (2014). RNA Polymerase III promoter screen uncovers a novel noncoding RNA family conserved in Caenorhabditis and other clade V nematodes. Gene, 544(2), 236-40.

Traunmüller, L.; Bornmann, C.; Scheiffele, P. (2014). Alternative Splicing Coupled Nonsense-Mediated Decay Generates Neuronal Cell Type-Specific Expression of SLM Proteins. Journal of Neuroscience, 34(50), 16755-61.

BoseDasgupta, Somdeb; Pieters, Jean (2014). How to clear a pathogen during inflammation: switching from phagocytosis to macropinocytosis through coronin 1 phosphorylation. Inflammation and cell signaling, 1(4), e199.

Jug, Florian; Pietzsch, Tobias; Kainmüller, Dagmar; Funke, Jan; Kaiser, Matthias; van Nimwegen, Erik; Rother, Carsten; Myers, Gene: Optimal joint segmentation and tracking of Escherichia coli in the mother machine, in: Cardoso, M. Jorge; Simpson, Ivor; Arbel, Tal; Precup, Doina; Ribbens, Annemie (Ed.). (2014). Bayesian and grAphical models for biomedical imaging : First International Workshop, BAMBI 2014, Cambridge, MA, USA, September 18, 2014 ; revised selected papers, Cham: Springer , S. 25-36.

Rämö, P; Drewek, A; Arrieumerlou, C; Beerenwinkel, N; Ben-Tekaya, H; Bühlmann, P; Cardel, B; Casanova, A; Conde-Alvarez, R; Cossart, P; Csúcs, G; Eicher, S; Emmenlauer, M; Greber, U; Hardt, W-D; Helenius, A; Kasper, C; Kaufmann. A; Kreibich, S; Kühbacher, A; Kunszt, P.; Low, SH; Mercer, J; Mudrak, D; Muntwiler, S; Pelkmans, L; Pizarro-Cerdá, J; Podvinec, M; Pujadas, E; Rinn, B; Rouilly, V; Schmich, F; Siebourg, J; Snijder, B; Stebler, M; Studer, G; Szczurek, E; Truttmann, M; von Mering, C; Vonderheit, A; Yakimovich, A; Dehio, C (2014). Simultaneous analysis of large-scale RNAi screens for pathogen entry. BMC Genomics, 15, 1162.

Haas, Jürgen; Schwede, Torsten (2014). Unabhängige Validierung von Methoden zur Proteinstrukturvorhersage. Biospektrum, 20(2), 236-237.

Muir, Dylan R; Cook, Matthew (2014). Anatomical Constraints on Lateral Competition in Columnar Cortical Architectures. Neural computation, 26(8), 1624-66.

Spang, Anne: Die Biomedizin im Umbruch, 10-142014.

Lima, W. C.; Vinet, A.; Pieters, J.; Cosson, P. (2014). Role of PKD2 in Rheotaxis in Dictyostelium. PLoS ONE, 9(2), e88682.

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