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BC2 - Basel Computational Biology Seminar Series - Spring Semester 2018

18.02.2019 | Michael Manhart, ETH Zürich 

Michael Manhart
Institute of Integrative Biology, ETH Zürich
Zürich, Schweiz

High-resolution dynamics of lineage diversity during adaptation to weak antibiotic pressure 
Date: Monday, February 18, 2019 
Time: 16:00h 
Room:  Lounge, level E13, Klingelbergstr. 61 (vis-a-vis Pharmazentrum)
Contact: Nicholas Noll    

25.02.19 | Vicent Pelechano, Karolinska Institutet

Vicent Pelechano
Science for Life Laboratory, Karolinska Institutet
Solna, Sweden

Genome-wide study of transcription complexity and ribosome dynamics   
Date: Monday, February 25, 2019 
Time: 16:00h
Room: Biozentrum, Room 103
Contact: Vincent Jaquet  

04.03.19 | Robert Schneider, Université de Lille

Robert Schneider
NMR & Molecular Interactions
CNRS & Université de Lille
Lille, France

Coupled folding and binding of intrinsically disordered proteins to their partners: an interaction "filmed" by NMR spectroscopy 
Date: Monday, March 04, 2019 
Time: 16:00h 
Room: Pharmazentrum, HS2
Contact: Gabriel Studer 

18.03.19 | Manuel Irimia, Centre of Genomic Regulation Barcelona

Manuel Irimia
EMBL/CRG Research Unit in Systems Biology Centre for Genomic Regulation 
Barcelona, Spain

Proteome remodeling by neuronal-specific microexons 
Date: Monday, March 18, 2019 
Time: 16:00h 
Room: Lounge, level E13, Klingelbergstr. 61 (vis-a-vis Pharmazentrum)
Contact: Maria KatsantoniOriane Mauger     

25.03.19 | Vassily Hatzimanikatis, EPFL

Vassily Hatzimanikatis
Laboratory of computational systems biotechnology
Institute of Chemistry and Chemical Engineering
EPFL , Lausanne

Models, databases and computational methods for analysis, synthesis and design in synthetic metabolism 
Date: Monday, March 25, 2019 
Time: 16:00h 
Room: Lounge, level E13, Klingelbergstr. 61 (vis-a-vis Pharmazentrum)
Contact: Vincent Jaquet    

01.04.19 | Pierre Neveu, EMBL Heidelberg

Pierre Neveu
European Molecular Biology Laboratory (EMBL)
Heidelberg, Germany

MorphoSeq: Complete tracing of single cell transcriptome dynamics from zygote to gastrulation in a chordate
Date: Monday, April 01, 2019 
Time: 16:00h
Room: Lounge, level E13, Klingelbergstr. 61 (vis-a-vis Pharmazentrum)
Contact: Nicholas Noll    

08.04.19 | Rémy Chait, IST Austria  

Rémy Chait  
Living Systems Institute, University of Exeter
Exeter, Devon UK 

Probing group behaviors of genes and cells via biology-computer interface 
Date: Monday, April 08, 2019 
Time: 16:00h 
Room: Lounge, level E13, Klingelbergstr. 61 (vis-a-vis Pharmazentrum)
Contact: Thomas Julou     

15.04.19 | Yaron Orenstein,  Ben-Gurion University 

Yaron Orenstein
Department of Electrical and Computer Engineering
Ben-Gurion University of the Negev
Be'er-Sheva, Israel

Deep learning for RNA structure and protein-RNA interactions prediction 
Date: Monday, April 15, 2019
Time: 16:00h 
Room: Lounge, level E13, Klingelbergstr. 61 (vis-a-vis Pharmazentrum)
Contact: Maria Katsantoni   

06.05.19 | Julian König, IMB Mainz

Julian König
Institute of Molecular Biology gGmbH 
Mainz, Germany

Genomic views of splicing regulation
Date: Monday, May 6, 2019 
Time: 16:00h 
Room: Pharmazentrum HS2 
Contact: Maria Katsantoni 

13.05.19 | Nuno Luís Barbosa Morais, iMM Lisboa

Nuno Luís Barbosa Morais
Instituto de Medicina Molecular (iMM)
Lisboa, Portugal

Computational biology in the translation of cancer transcriptomics 
Date: Monday, May 13, 2019 
Time: 16:00h 
Room: Lounge, level E13, Klingelbergstr. 61 (vis-a-vis Pharmazentrum)
Contact: Maria Katsantoni 

27.05.19 | Daniel Zerbino, EMBL-EBI  

Daniel Zerbino
The European Bioinformatics Institute EMBL-EBI
Wellcome Genome Campus, Hinxton, UK

Functional annotation of GWAS regulatory variants 
Date: Monday, May 27, 2019 
Time: 16:00h 
Room: Lounge, level E13, Klingelbergstr. 61 (vis-a-vis Pharmazentrum)
Contact: Maria Katsantoni