Navigation mit Access Keys

Bärland, N., Rueff, A.-S., Cebrero, G., Hutter, C. A. J., Seeger, M. A., Veening, J.-W. and Perez, C. (2021) ‘Mechanistic basis of choline import involved in teichoic acids and lipopolysaccharide modification’, bioRxiv. Cold Spring Harbor Laboratory. doi: 10.1101/2021.09.14.460277.   edoc | Open Access
Solinger, J., Rashid, H.-O. and Spang, A. (2021) ‘FERARI and cargo adaptors coordinate cargo flow through sorting endosomes’. Durham, NC: Research Square. doi: 10.21203/   edoc | Open Access
Podinovskaia, M., Prescianotto-Baschong, C., Buser, D. P. and Spang, A. (2021) ‘A novel live cell imaging assay reveals regulation of endosome maturation’, bioRxiv. Cold Spring Harbor Laboratory. doi: 10.1101/2021.06.28.450147.   edoc | Open Access
Diaz-Pascual, F., Lempp, M., Nosho, K., Jeckel, H., Jo, J. K., Neuhaus, K., Hartmann, R., Jelli, E., Hansen, M. F., Price-Whelan, A., Dietrich, L. E. P., Link, H. and Drescher, K. (2021) ‘Spatial alanine metabolism determines local growth dynamics of Escherichia coli colonies’, bioRxiv. Cold Spring Harbor Laboratory. doi: 10.1101/2021.02.28.433255.   edoc | Open Access
Singh, P. K., Rode, D. K. H., Buffard, P., Nosho, K., Bayer, M., Jeckel, H., Jelli, E., Neuhaus, K., Jiménez-Siebert, E., Peschek, N., Glatter, T., Papenfort, K. and Drescher, K. (2021) ‘Vibrio cholerae biofilm dispersal regulator causes cell release from matrix through type IV pilus retraction’, bioRxiv. Cold Spring Harbor Laboratory. doi: 10.1101/2021.05.02.442311.   edoc | Open Access
Tocchini, C., Rohner, M., Von Stetina, S. E. and Mango, S. E. (2021) ‘Translation-dependent mRNA localization to Caenorhabditis elegans adherens junctions’. bioRxiv. doi: 10.1101/2021.05.20.444977.   edoc
Cohen, J. D., Cadena del Castillo, C. E., Kaech, A., Spang, A. and Sundaram, M. (2021) ‘The C. elegans PTCHD homolog PTR-4 is required for proper organization of the pre-cuticular apical extracellular matrix’. bioRxiv. doi: 10.1101/2021.03.30.437696.   edoc
Maffei, E., Shaidullina, A., Burkolter, M., Druelle, V., Willi, L., Estermann, F., Michaelis, S., Hilbi, H., Thaler, D. S. and Harms, A. (2021) ‘Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection’. bioRxiv. doi: 10.1101/2021.03.08.434280.   edoc | Open Access
Shafer, M. E. R., Sawh, A. N. and Schier, A. F. (2021) ‘Gene family evolution underlies cell type diversification in the hypothalamus of teleosts’. bioRxiv. doi: 10.1101/2020.12.13.414557.   edoc
Jeckel, H. and Drescher, K. (2021) ‘Advances and opportunities in image analysis of bacterial cells and communities’, FEMS Microbiology Reviews, 45(4), p. fuaa062. doi: 10.1093/femsre/fuaa062.   edoc | Open Access
Hauser, D. (2021) Regulation of synaptic adhesion molecules by RNA processing.   edoc
Rashid, H.-O. (2021) FERARI: A multi-protein tethering platform involved in endocytic recycling.   edoc
Fiori, A. (2021) Stochastic gene expression and lag time in bacteria.   edoc | Open Access
Furlanis, E. (2021) Beyond gene expression: post-transcriptional mechanisms for the regulation of neuronal identity and function.   edoc
Voitov, I. (2021) Neural Circuits for Visual Working Memory.   edoc | Open Access
Wasson, J. A., Harris, G., Keppler-Ross, S., Brock, T. J., Dar, A. R., Butcher, R. A., Fischer, S. E. J., Kagias, K., Clardy, J., Zhang, Y. and Mango, S. E. (2021) ‘Neuronal control of maternal provisioning in response to social cues’, Science Advances, 7(34), p. eabf8782. doi: 10.1126/sciadv.abf8782.   edoc | Open Access
Affolter, M. (2021) ‘Preface’, Current Topics in Developmental Biology, 143, p. xi-xiv. doi: 10.1016/S0070-2153(21)00040-5.   edoc
Sharma, D., Lim, R. Y. H., Pfohl, T. and Ekinci, Y. (2021) ‘Surface-modified elastomeric nanofluidic devices for single nanoparticle trapping’, Microsystems & Nanoengineering, 7, p. 46. doi: 10.1038/s41378-021-00273-y.   edoc
Scott, D. E., Francis-Newton, N. J., Marsh, M. E., Coyne, A. G., Fischer, G., Moschetti, T., Bayly, A. R., Sharpe, T. D., Haas, K. T., Barber, L., Valenzano, C. R., Srinivasan, R., Huggins, D. J., Lee, M., Emery, A., Hardwick, B., Ehebauer, M., Dagostin, C., Esposito, A., Pellegrini, L., Perrior, T., McKenzie, G., Blundell, T. L., Hyvönen, M., Skidmore, J., Venkitaraman, A. R. and Abell, C. (2021) ‘A small-molecule inhibitor of the BRCA2-RAD51 interaction modulates RAD51 assembly and potentiates DNA damage-induced cell death’, Cell chemical biology, 28(6), pp. 835–847.e5. doi: 10.1016/j.chembiol.2021.02.006.   edoc
Jung, S.-J., Kim, J. E. H., Junne, T., Spiess, M. and Kim, H. (2021) ‘Cotranslational Targeting and Posttranslational Translocation can Cooperate in Spc3 Topogenesis’, Journal of Molecular Biology, 433(18), p. 167109. doi: 10.1016/j.jmb.2021.167109.   edoc
Janoschke, M., Zimmermann, M., Brunauer, A., Humbel, R., Junne, T. and Spiess, M. (2021) ‘Efficient integration of transmembrane domains depends on the folding properties of the upstream sequences’, Proceedings of the National Academy of Sciences of the United States of America, 118(33), p. e2102675118. doi: 10.1073/pnas.2102675118.   edoc
Kochan, D. Z., Mawer, J. S. P., Massen, J., Tishinov, K., Parekh, S., Graef, M., Spang, A. and Tessarz, P. (2021) ‘The RNA-binding protein Puf5 contributes to buffering of mRNA upon chromatin-mediated changes in nascent transcription’, Journal of Cell Science, 134(15), p. jcs259051. doi: 10.1242/jcs.259051.   edoc | Open Access
Lord, N. D., Carte, A. N., Abitua, P. B. and Schier, A. F. (2021) ‘The pattern of nodal morphogen signaling is shaped by co-receptor expression’, eLife, 10, p. 54894. doi: 10.7554/eLife.54894.   edoc | Open Access
Jia, J.-J., Lahr, R. M., Solgaard, M. T., Moraes, B. J., Pointet, R., Yang, A.-D., Celucci, G., Graber, T. E., Hoang, H.-D., Niklaus, M. R., Pena, I. A., Hollensen, A. K., Smith, E. M., Chaker-Margot, M., Anton, L., Dajadian, C., Livingstone, M., Hearnden, J., Wang, X.-D., Yu, Y., Maier, T., Damgaard, C. K., Berman, A. J., Alain, T. and Fonseca, B. D. (2021) ‘mTORC1 promotes TOP mRNA translation through site-specific phosphorylation of LARP1’, Nucleic Acids Research, 49(6), pp. 3461–3489. doi: 10.1093/nar/gkaa1239.   edoc
Kaur, H., Jakob, R. P., Marzinek, J. K., Green, R., Imai, Y., Bolla, J. R., Agustoni, E., Robinson, C. V., Bond, P. J., Lewis, K., Maier, T. and Hiller, S. (2021) ‘The antibiotic darobactin mimics a β-strand to inhibit outer membrane insertase’, Nature, 593(7857), pp. 125–129. doi: 10.1038/s41586-021-03455-w.   edoc
Pipercevic, J., Jakob, R. P., Righetto, R. D., Goldie, K. N., Stahlberg, H., Maier, T. and Hiller, S. (2021) ‘Identification of a Dps contamination in Mitomycin-C-induced expression of Colicin Ia’, Biochimica et Biophysica Acta (BBA) - Biomembranes, 1863(7), p. 183607. doi: 10.1016/j.bbamem.2021.183607.   edoc
Perkins, A., Tudorica, D. A., Teixeira, R. D., Schirmer, T., Zumwalt, L., Ogba, O. M., Cassidy, C. K., Stansfeld, P. J. and Guillemin, K. (2021) ‘A Bacterial Inflammation Sensor Regulates c-di-GMP Signaling, Adhesion, and Biofilm Formation’, mBio, 12(3), p. e0017321. doi: 10.1128/mBio.00173-21.   edoc
Righetto, R. and Stahlberg, H. (2021) ‘Single Particle Analysis for High-Resolution 2D Electron Crystallography’, Methods in Molecular Biology, 2215, pp. 267–284. doi: 10.1007/978-1-0716-0966-8_12.   edoc
Gray, D. A., White, J. B. R., Oluwole, A. O., Rath, P., Glenwright, A. J., Mazur, A., Zahn, M., Baslé, A., Morland, C., Evans, S. L., Cartmell, A., Robinson, C. V., Hiller, S., Ranson, N. A., Bolam, D. N. and van den Berg, B. (2021) ‘Insights into SusCD-mediated glycan import by a prominent gut symbiont’, Nature Communications, 12(1), p. 44. doi: 10.1038/s41467-020-20285-y.   edoc
Sjögren, R. J. O., Rizo-Roca, D., Chibalin, A. V., Chorell, E., Furrer, R., Katayama, S., Harada, J., Karlsson, H. K. R., Handschin, C., Moritz, T., Krook, A., Näslund, E. and Zierath, J. R. (2021) ‘Branched-chain amino acid metabolism is regulated by ERRα in primary human myotubes and is further impaired by glucose loading in type 2 diabetes’, Diabetologia, 64(9), pp. 2077–2091. doi: 10.1007/s00125-021-05481-9.   edoc
Ruder, L., Schina, R., Kanodia, H., Valencia-Garcia, S., Pivetta, C. and Arber, S. (2021) ‘A functional map for diverse forelimb actions within brainstem circuitry’, Nature, 590(7846), pp. 445–450. doi: 10.1038/s41586-020-03080-z.   edoc
Ferreira-Pinto, M. J., Kanodia, H., Falasconi, A., Sigrist, M., Esposito, M. S. and Arber, S. (2021) ‘Functional diversity for body actions in the mesencephalic locomotor region’, Cell, 184(17), pp. 4564–4578.e18. doi: 10.1016/j.cell.2021.07.002.   edoc
Gomez, A. M., Traunmüller, L. and Scheiffele, P. (2021) ‘Neurexins: molecular codes for shaping neuronal synapses’, Nature reviews. Neuroscience, 22(3), pp. 137–151. doi: 10.1038/s41583-020-00415-7.   edoc
Cramer, J., Aliu, B., Jiang, X., Sharpe, T., Pang, L., Hadorn, A., Rabbani, S. and Ernst, B. (2021) ‘Poly-l-lysine Glycoconjugates Inhibit DC-SIGN-mediated Attachment of Pandemic Viruses’, ChemMedChem, 16(15), pp. 2345–2353. doi: 10.1002/cmdc.202100348.   edoc
Blum, T. B., Housset, D., Clabbers, M. T. B., van Genderen, E., Bacia-Verloop, M., Zander, U., McCarthy, A. A., Schoehn, G., Ling, W. L. and Abrahams, J. P. (2021) ‘Statistically correcting dynamical electron scattering improves the refinement of protein nanocrystals, including charge refinement of coordinated metals’, Acta Crystallographica Section D: Structural Biology, 77, pp. 75–85. doi: 10.1107/S2059798320014540.   edoc
Hoogenboom, B. W., Hough, L. E., Lemke, E. A., Lim, R. Y. H., Onck, P. R. and Zilman, A. (2021) ‘Physics of the nuclear pore complex: Theory, modeling and experiment’, Physics reports, 921, pp. 1–53. doi: 10.1016/j.physrep.2021.03.003.   edoc
Kalita, J., Kapinos, L. E. and Lim, R. Y. H. (2021) ‘On the asymmetric partitioning of nucleocytoplasmic transport - recent insights and open questions’, Journal of cell science, 134(7), p. jcs240382. doi: 10.1242/jcs.240382.   edoc
Lee, M., Betz, C., Yin, J., Paatero, I., Schellinx, N., Carte, A. N., Wilson, C. W., Ye, W., Affolter, M. and Belting, H.-G. (2021) ‘Control of dynamic cell behaviors during angiogenesis and anastomosis by Rasip1’, Development, 148(15), p. dev197509. doi: 10.1242/dev.197509.   edoc
Vigano, M. A., Ell, C.-M., Kustermann, M. M. M., Aguilar, G., Matsuda, S., Zhao, N., Stasevich, T. J., Affolter, M. and Pyrowolakis, G. (2021) ‘ Drosophila melanogaster’;, Development, 148(6), p. dev191700. doi: 10.1242/dev.191700.   edoc
Chiyoda, H., Kume, M., Del Castillo, C. C., Kontani, K., Spang, A., Katada, T. and Fukuyama, M. (2021) ‘Caenorhabditis elegans PTR/PTCHD PTR-18 promotes the clearance of extracellular hedgehog-related protein via endocytosis’, PLoS genetics, 17(4), p. e1009457. doi: 10.1371/journal.pgen.1009457.   edoc
Ghosh, S., Börsch, A., Ghosh, S. and Zavolan, M. (2021) ‘The transcriptional landscape of a hepatoma cell line grown on scaffolds of extracellular matrix proteins’, BMC Genomics, 22(1), p. 238. doi: 10.1186/s12864-021-07532-2.   edoc
Cléry, A., Krepl, M., Nguyen, C. K. X., Moursy, A., Jorjani, H., Katsantoni, M., Okoniewski, M., Mittal, N., Zavolan, M., Sponer, J. and Allain, F. H.-T. (2021) ‘Structure of SRSF1 RRM1 bound to RNA reveals an unexpected bimodal mode of interaction and explains its involvement in SMN1 exon7 splicing’, Nature Communications, 12(1), p. 428. doi: 10.1038/s41467-020-20481-w.   edoc
Karousis, E. D., Gypas, F., Zavolan, M. and Mühlemann, O. (2021) ‘Nanopore sequencing reveals endogenous NMD-targeted isoforms in human cells’, Genome Biology, 22(1), p. 223. doi: 10.1186/s13059-021-02439-3.   edoc
Bloom, J. D., Chan, Y. A., Baric, R. S., Bjorkman, P. J., Cobey, S., Deverman, B. E., Fisman, D. N., Gupta, R., Iwasaki, A., Lipsitch, M., Medzhitov, R., Neher, R. A., Nielsen, R., Patterson, N., Stearns, T., van Nimwegen, E., Worobey, M. and Relman, D. A. (2021) ‘Investigate the origins of COVID-19’, Science, 372(6543), p. 694. doi: 10.1126/science.abj0016.   edoc
Grapotte, M., Saraswat, M., Bessière, C., Menichelli, C., Ramilowski, J. A., Severin, J., Hayashizaki, Y., Itoh, M., Tagami, M., Murata, M., Kojima-Ishiyama, M., Noma, S., Noguchi, S., Kasukawa, T., Hasegawa, A., Suzuki, H., Nishiyori-Sueki, H., Frith, M. C., Fantom consortium, Chatelain, C., Carninci, P., de Hoon, M. J. L., Wasserman, W. W., Bréhélin, L. and Lecellier, C.-H. (2021) ‘Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network’, Nature Communications, 12(1), p. 3297. doi: 10.1038/s41467-021-23143-7.   edoc
Sharma, D., Lim, R. Y. H., Pfohl, T. and Ekinci, Y. (2021) ‘Optimization of Nanofluidic Devices for Geometry-Induced Electrostatic Trapping’, Particle & Particle Systems Characterization, 38(2), p. 2170003. doi: 10.1002/ppsc.202170003.   edoc
Studer, G., Tauriello, G., Bienert, S., Biasini, M., Johner, N. and Schwede, T. (2021) ‘ProMod3-A versatile homology modelling toolbox’, PLoS Computational Biology, 17(1), p. e1008667. doi: 10.1371/journal.pcbi.1008667.   edoc
Breda, J., Zavolan, M. and van Nimwegen, E. (2021) ‘Bayesian inference of gene expression states from single-cell RNA-seq data’, Nature Biotechnology, 39(8), pp. 1008–1016. doi: 10.1038/s41587-021-00875-x.   edoc
Sakoparnig, T., Field, C. and van Nimwegen, E. (2021) ‘Whole genome phylogenies reflect the distributions of recombination rates for many bacterial species’, eLife, 10, p. e65366. doi: 10.7554/eLife.65366.   edoc
Mari, A., Roloff, T., Stange, M., Søgaard, K. K., Asllanaj, E., Tauriello, G., Alexander, L. T., Schweitzer, M., Leuzinger, K., Gensch, A., Martinez, A. E., Bielicki, J., Pargger, H., Siegemund, M., Nickel, C. H., Bingisser, R., Osthoff, M., Bassetti, S., Sendi, P., Battegay, M., Marzolini, C., Seth-Smith, H. M. B., Schwede, T., Hirsch, H. H. and Egli, A. (2021) ‘Global Genomic Analysis of SARS-CoV-2 RNA Dependent RNA Polymerase Evolution and Antiviral Drug Resistance’, Microorganisms, 9(5), p. 1094. doi: 10.3390/microorganisms9051094.   edoc
Börsch, A., Ham, D. J., Mittal, N., Tintignac, L. A., Migliavacca, E., Feige, J. N., Rüegg, M. A. and Zavolan, M. (2021) ‘Molecular and phenotypic analysis of rodent models reveals conserved and species-specific modulators of human sarcopenia’, Communications Biology, 4(1), p. 194. doi: 10.1038/s42003-021-01723-z.   edoc
Coto-Llerena, M., Tosti, N., Taha-Mehlitz, S., Kancherla, V., Paradiso, V., Gallon, J., Bianco, G., Garofoli, A., Ghosh, S., Tang, F., Ercan, C., Christofori, G. M., Matter, M. S., Droeser, R. A., Zavolan, M., Soysal, S. D., von Flüe, M., Kollmar, O., Terracciano, L. M., Ng, C. K. Y. and Piscuoglio, S. (2021) ‘Transcriptional Enhancer Factor Domain Family member 4 Exerts an Oncogenic Role in Hepatocellular Carcinoma by Hippo-Independent Regulation of Heat Shock Protein 70 Family Members’, Hepatology Communications, 5(4), pp. 661–674. doi: 10.1002/hep4.1656.   edoc
Isaikina, P., Tsai, C.-J., Dietz, N., Pamula, F., Grahl, A., Goldie, K. N., Guixà-González, R., Branco, C., Paolini-Bertrand, M., Calo, N., Cerini, F., Schertler, G. F. X., Hartley, O., Stahlberg, H., Maier, T., Deupi, X. and Grzesiek, S. (2021) ‘Structural basis of the activation of the CC chemokine receptor 5 by a chemokine agonist’, Science Advances, 7(25), p. eabg8685. doi: 10.1126/sciadv.abg8685.   edoc | Open Access
Favaloro, F. (2021) The miR-17~92 cluster regulates adult neural stem cell behavior.   edoc | Open Access
Matos, A. L. L., Keller, F., Wegner, T., Del Castillo, C. E. C., Grill, D., Kudruk, S., Spang, A., Glorius, F., Heuer, A. and Gerke, V. (2021) ‘CHIMs are versatile cholesterol analogs mimicking and visualizing cholesterol behavior in lipid bilayers and cells’, Communications Biology, 4(1), p. 720. doi: 10.1038/s42003-021-02252-5.   edoc | Open Access
Hartmann, R., Jeckel, H., Jelli, E., Singh, P. K., Vaidya, S., Bayer, M., Rode, D. K. H., Vidakovic, L., Díaz-Pascual, F., Fong, J. C. N., Dragoš, A., Lamprecht, O., Thöming, J. G., Netter, N., Häussler, S., Nadell, C. D., Sourjik, V., Kovács, Ákos T., Yildiz, F. H. and Drescher, K. (2021) ‘Quantitative image analysis of microbial communities with BiofilmQ’, Nature Microbiology, 6(2), pp. 151–156. doi: 10.1038/s41564-020-00817-4.   edoc | Open Access
Skinner, D. J., Song, B., Jeckel, H., Jelli, E., Drescher, K. and Dunkel, J. (2021) ‘Topological Metric Detects Hidden Order in Disordered Media’, Physical Review Letters, 126(4), p. 48101. doi: 10.1103/PhysRevLett.126.048101.   edoc | Open Access
Maestre-Reyna, M., Huang, W.-C., Wu, W.-J., Singh, P. K., Hartmann, R., Wang, P.-H., Lee, C.-C., Hikima, T., Yamamoto, M., Bessho, Y., Drescher, K., Tsai, M.-D. and Wang, A. H.-J. (2021) ‘Vibrio cholerae biofilm scaffolding protein RbmA shows an intrinsic, phosphate-dependent autoproteolysis activity’, IUBMB Life, 73(2), pp. 418–431. doi: 10.1002/iub.2439.   edoc | Open Access
Shetty, S. and Hall, M. N. (2021) ‘More writing: mTORC1 promotes m; 6; A mRNA methylation’, Molecular Cell, 81(10), pp. 2057–2058. doi: 10.1016/j.molcel.2021.04.020.   edoc
Böhm, R., Imseng, S., Jakob, R. P., Hall, M. N., Maier, T. and Hiller, S. (2021) ‘The dynamic mechanism of 4E-BP1 recognition and phosphorylation by mTORC1’, Molecular Cell, 81(11), pp. 2403–2416.e5. doi: 10.1016/j.molcel.2021.03.031.   edoc
Spang, A. (2021) ‘Means of intracellular communication: touching, kissing, fusing’, Microbial Cell, 8(5), pp. 87–90. doi: 10.15698/mic2021.05.747.   edoc | Open Access
Fuentes, D. A. F., Manfredi, P., Jenal, U. and Zampieri, M. (2021) ‘Pareto optimality between growth-rate and lag-time couples metabolic noise to phenotypic heterogeneity in Escherichia coli’, Nature Communications, 12, p. 3204. doi: 10.1038/s41467-021-23522-0.   edoc | Open Access
Iakovlev, M., Faravelli, S. and Becskei, A. (2021) ‘Gene Families With Stochastic Exclusive Gene Choice Underlie Cell Adhesion in Mammalian Cells’, Frontiers in Cell and Developmental Biology, 9, p. 642212. doi: 10.3389/fcell.2021.642212.   edoc | Open Access
Schina, R. (2021) Brainstem circuits involved in skilled forelimb movements.   edoc | Open Access
Abiko, L. A., Rogowski, M., Gautier, A., Schertler, G. and Grzesiek, S. (2021) ‘Efficient production of a functional G protein-coupled receptor in E. coli for structural studies’, Journal of Biomolecular NMR, 75(1), pp. 25–38. doi: 10.1007/s10858-020-00354-6.   edoc | Open Access
Seuring, C., Verasdonck, J., Ringler, P., Cadalbert, R., Stahlberg, H., Böckmann, A., Meier, B. H. and Riek, R. (2021) ‘Correction to “Amyloid Fibril Polymorphism: Almost Identical on the Atomic Level, Mesoscopically Very Different”’, The Journal of Physical Chemistry B, 125(1), p. 484. doi: 10.1021/acs.jpcb.0c10858.   edoc
Laborenz, J., Bykov, Y. S., Knöringer, K., Räschle, M., Filker, S., Prescianotto-Baschong, C., Spang, A., Tatsuta, T., Langer, T., Storchová, Z., Schuldiner, M. and Herrmann, J. M. (2021) ‘The ER protein Ema19 facilitates the degradation of non-imported mitochondrial precursor proteins’, Molecular Biology of the Cell, 32(8), pp. 664–674. doi: 10.1091/mbc.E20-11-0748.   edoc | Open Access
Kotini, M. P., Bachmann, F., Spickermann, J., McSheehy, P. M. and Affolter, M. (2021) ‘Probing the Effects of the FGFR-Inhibitor Derazantinib on Vascular Development in Zebrafish Embryos’, Pharmaceuticals, 14(1), p. 25. doi: 10.3390/ph14010025.   edoc | Open Access
Tomašič, T., Rabbani, S., Jakob, R. P., Reisner, A., Jakopin, Žiga, Maier, T., Ernst, B. and Anderluh, M. (2021) ‘Does targeting Arg98 of FimH lead to high affinity antagonists?’, European Journal of Medicinal Chemistry, 211, p. 113093. doi: 10.1016/j.ejmech.2020.113093.   edoc
Teixeira, R. D., Holzschuh, F. and Schirmer, T. (2021) ‘Activation mechanism of a small prototypic Rec-GGDEF diguanylate cyclase’, Nature Communications, 12, p. 2162. doi: 10.1038/s41467-021-22492-7.   edoc | Open Access
Yin, J., Heutschi, D., Belting, H.-G. and Affolter, M. (2021) ‘Building the complex architectures of vascular networks: Where to branch, where to connect and where to remodel?’, Current topics in developmental biology, 143, pp. 281–297. doi: 10.1016/bs.ctdb.2021.01.002.   edoc
Lengweiler, N. L. (2021) Freestanding Ultrathin Nanomembranes as Sample Supports for Structural Studies.   edoc
Dietz, N., Huber, M., Sorg, I., Goepfert, A., Harms, A., Schirmer, T. and Dehio, C. (2021) ‘Structural basis for selective AMPylation of Rac-subfamily GTPases by Bartonella effector protein 1 (Bep1)’, Proceedings of the National Academy of Sciences, 118(12), p. e2023245118. doi: 10.1073/pnas.2023245118.   edoc | Open Access
Winkler, S. C. (2021) PKCγ-mediated phosphorylation of CRMP2 regulates dendritic outgrowth in cerebellar Purkinje cells.   edoc | Open Access
Fenyves, B. G., Arnold, A., Gharat, V. G., Haab, C., Tishinov, K., Peter, F., de Quervain, D., Papassotiropoulos, A. and Stetak, A. (2021) ‘Dual Role of an mps-2/KCNE-Dependent Pathway in Long-Term Memory and Age-Dependent Memory Decline’, Current Biology, 31(3), pp. 527–539.e7. doi: 10.1016/j.cub.2020.10.069.   edoc
Santi, I., Manfredi, P., Maffei, E., Egli, A. and Jenal, U. (2021) ‘Evolution of Antibiotic Tolerance Shapes Resistance Development in Chronic Pseudomonas aeruginosa Infections’, mBio, 12(1), pp. e03482–20. doi: 10.1128/mBio.03482-20.   edoc | Open Access
Meeuse, M. W. M. (2021) Functional dissection of a gene expression oscillator in C. elegans.   edoc | Open Access
Otte, F. (2021) HIV-1 Reservoir Formation, Stability and Dynamics during early Therapy.   edoc
Donato, F., Alberini, C. M., Amso, D., Dragoi, G., Dranovsky, A. and Newcombe, N. S. (2021) ‘The Ontogeny of Hippocampus-Dependent Memories’, Journal of Neuroscience, 41(5), pp. 920–926. doi: 10.1523/JNEUROSCI.1651-20.2020.   edoc | Open Access
Battey, E., Furrer, R., Ross, J., Handschin, C., Ochala, J. and Stroud, M. J. (2021) ‘PGC-1α regulates myonuclear accretion after moderate endurance training’, Journal of cellular physiology, Jul 28, p. doi: 10.1002/jcp.30539. doi: 10.1002/jcp.30539.   
Seelig, J. and Seelig, A. (2021) ‘Molecular Understanding of Calorimetric Protein Unfolding Experiments’, bioRxiv, p. -. doi: 10.1101/2021.08.10.455817.   
Wälchli, M., Berneiser, K., Mangia, F., Imseng, S., Craigie, L.-M., Stuttfeld, E., Hall, M. N. and Maier, T. (2021) ‘Regulation of human mTOR complexes by DEPTOR’, eLife, 10, p. 70871. doi: 10.7554/eLife.70871.   
Li-Blatter, X., Zweifel, L. and Sharpe, T. (2021) ‘A Familiar Protein-Ligand Interaction Revisited with Multiple Methods’, Methods in molecular biology (Clifton, N.J.), 2263, pp. 47–79. doi: 10.1007/978-1-0716-1197-5_2.   
Robin, X., Haas, J., Gumienny, R., Smolinski, A., Tauriello, G. and Schwede, T. (2021) ‘Continuous Automated Model EvaluatiOn (CAMEO)-Perspectives on the future of fully automated evaluation of structure prediction methods’, Proteins, p. Epub ahead of print. doi: 10.1002/prot.26213.   
Leuchtmann, A. B., Adak, V., Dilbaz, S. and Handschin, C. (2021) ‘The Role of the Skeletal Muscle Secretome in Mediating Endurance and Resistance Training Adaptations’, Frontiers in physiology, 12, p. 709807. doi: 10.3389/fphys.2021.709807.   
Lambert, E., Mehdipour, A. R., Schmidt, A., Hummer, G. and Perez, C. (2021) ‘Evidence for a trap-and-flip mechanism in a proton-dependent lipid transporter’, bioRxiv, p. Cold Spring Harbor Laboratory. doi: 10.1101/2021.08.05.453402.   
Schirmer, T., de Beer, T. A. P., Tamegger, S., Harms, A., Dietz, N., Dranow, D. M., Edwards, T. E., Myler, P. J., Phan, I. and Dehio, C. (2021) ‘Evolutionary Diversification of Host-Targeted; Bartonella; Effectors Proteins Derived from a Conserved FicTA Toxin-Antitoxin Module’, Microorganisms, 9(8), p. 23. doi: 10.3390/microorganisms9081645.   
Bärland, N. and Perez, C. (2021) ‘Selection of Transporter-Targeted Inhibitory Nanobodies by Solid-Supported-Membrane (SSM)-Based Electrophysiology’, J. Vis. Exp, 171, p. e62578. doi: 10.3791/62578.   
Maier, G., Delezie, J., Westermark, P. O., Santos, G., Ritz, D. and Handschin, C. (2021) ‘Transcriptomic, proteomic and phosphoproteomic underpinnings of daily exercise performance and zeitgeber activity of training in mouse muscle’, The Journal of Physiology, Jun 18, p. epub ahead of print. doi: 10.1113/JP281535.   
Henriques, G. J. B., van Vliet, S. and Doebeli, M. (2021) ‘Multilevel selection favors fragmentation modes that maintain cooperative interactions in multispecies communities’, PLoS computational biology, 17(9), p. e1008896. doi: 10.1371/journal.pcbi.1008896.   
Pérez-Schindler, J., Kohl, B., Schneider-Heieck, K., Leuchtmann, A. B., Henríquez-Olguín, C., Adak, V., Maier, G., Delezie, J., Sakoparnig, T., Vargas-Fernández, E., Karrer-Cardel, B., Ritz, D., Schmidt, A., Hondele, M., Jensen, T. E., Hiller, S. and Handschin, C. (2021) ‘RNA-bound PGC-1α controls gene expression in liquid-like nuclear condensates’, Proceedings of the National Academy of Sciences of the United States of America, 118(36), p. e2105951118. doi: 10.1073/pnas.2105951118.   
Furrer, R., Jauch, A. J., Nageswara Rao, T., Dilbaz, S., Rhein, P., Steurer, S. A., Recher, M., Skoda, R. C. and Handschin, C. (2021) ‘Remodeling of metabolism and inflammation by exercise ameliorates tumor-associated anemia’, Science Advances, 7(37), p. eabi4852. doi: 10.1126/sciadv.abi4852.   
Santi, I., Manfredi, P., Maffei, E., Egli, A. and Jenal, U. (2020) ‘Evolution of Antibiotic Tolerance Shapes Resistance Development in Chronic Pseudomonas aeruginosa Infections’. bioRxiv. doi: 10.1101/2020.10.23.352104.   edoc
Perkins, A., Tudorica, D. A., D. Teixeira, R., Schirmer, T., Zumwalt, L., Ogba, O. M., Cassidy, C. K., Stansfeld, P. J. and Guillemin, K. (2020) ‘A bacterial inflammation sensor regulates c-di-GMP signaling, adhesion, and biofilm formation’. bioRxiv. doi: 10.1101/2020.10.11.335190.   edoc | Open Access
Linder, M., Liko, D., Kancherla, V., Piscuoglio, S. and Hall, M. N. (2020) ‘Colitis is associated with loss of LHPP and up-regulation of histidine phosphorylation in intestinal epithelial cells’. bioRxiv. doi: 10.1101/2020.10.11.334334.   edoc | Open Access
Tishinov, K. and Spang, A. (2020) ‘Decapping complex is essential for functional P-body formation and is buffered by nuclear localization’. bioRxiv. doi: 10.1101/2020.09.07.285700.   edoc | Open Access
Teixeira, R. D., Holzschuh, F. and Schirmer, T. (2020) ‘Activation mechanism of a small prototypic Rec-GGDEF diguanylate cyclase’. bioRxiv. doi: 10.1101/2020.08.28.271692.   edoc | Open Access
Dietz, N. B., Huber, M., Sorg, I., Goepfert, A., Harms, A., Schirmer, T. and Dehio, C. (2020) ‘Structural basis for selective targeting of Rac subfamily GTPases by a bacterial effector protein’. bioRxiv. doi: 10.1101/2020.06.29.167221.   edoc | Open Access
Marlaire, S. and Dehio, C. (2020) ‘Bartonella effector protein C mediates actin stress fiber formation via recruitment of GEF-H1 to the plasma membrane’. bioRxiv. doi: 10.1101/2020.04.17.046482.   edoc
Scaiola, A., Mangia, F., Imseng, S., Boehringer, D., Berneiser, K., Shimobayashi, M., Stuttfeld, E., Hall, M. N., Ban, N. and Maier, T. (2020) ‘The 3.2Å resolution structure of human mTORC2’. bioRxiv. doi: 10.1101/2020.04.10.029835.   edoc | Open Access