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C2: Functional Organization of the Cell Nucleus – 13182

(2 hrs/week; 2 CP; Fall 2026)

Room U1.193, 09:15 - 11:15 h

Birthe Fahrenkrog, Roderick Lim

This course will describe the structure and function of the eukaryotic nucleus. The nucleus serves as the "brain" of the cell. It contains the genetic information and ensures that it is properly replicated, segregated, transcribed and repaired. Within the nucleus are functional compartments such as the nucleolus, whose function it is to produce ribosomes. The nucleus, which is membrane bound, has nuclear pores, which are complex, regulated machines that control the flow of material into and out of a nucleus. In this course, all features of the nucleus from regulated import/export through pores, to the compartmentalization of transcription, splicing, replication and repair will be covered. We will cover the pathology of nuclear defects, with a focus on mutations in structural components of the nucleus and how they compromise the integrity of the genome to cause tissue-specific disease. The structure and function of lamins and pore proteins intranscriptional control will be presented, as well as the structure and folding of chromosomes and their dynamics through the cell cycle. Subdiffusive movements of chromatin in interphase nuclei and the role of this dynamic behavior in repair and transcription will be discussed. The lectures will give an up-to-date overview of a complex structure-function problem that touches on crucial aspects of cell identity.

Program Fall Semester 2026

SPEAKER 

 Date 

Birthe Fahrenkrog – Nuclear pores, nucleocytoplasmic transport and beyond
(birthe.fahrenkrogunibasch / Biozentrum, University of Basel)

18 September

Matteo Allegretti - Built to deliver a genome: architecture of the most extreme nucleus in human cells and the molecular basis of male infertility (matteoallmrclmb.acuk / MRC Cambridge, UK)

25 September

Tobias Williams – The Journey of RNA: Nuclear speckles and mRNA Export.
(tobias.williamsfmich / Friedrich Miescher Institute for Biomedical Research, Basel)

2 October

Juliane Glaser – Transposable elements during mammalian development
(glaserjie-freiburg.mpgde / Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany)

9 October

Valentin Flury – Epigenome maintenance (across cell divisons)
(fluryie-freiburg.mpgde / Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany)

16 October

Susanne Wegmann – Nuclear actions of the microtubule associated protein Tau
(Susanne.Wegmanndznede  / Deutsches Zentrum f. Neurodegenerative Erkrankungen, Charité, Berlin, Germany)

23 October

Birthe Fahrenkrog – The Origin of the Cell Nucleus
(birthe.fahrenkrogunibasch / Biozentrum, University of Basel)

30 October

Valérie Hilgers – RNA Processing
(valerie.hilgersunibasch / Department Biomedicine, University of Basel)

6 November

Alexander von Appen – Nuclear self-assembly
(vonappenmpi-cbgde / MPI of Molecular Cell Biology and Genetics, Dresden, Germany)

13 November

Ramona Jühlen – Chromatin dynamics in mitosis
(rjuehlenukaachende / RWTH Aaachen, Germany)

20 November

Dies academicus -   no lecture 

27 November

Patrick Onck – Computational microscopy: visualizing nuclear transport at amino-acid resolution
(p.r.onckrugnl  / Rijksuniversiteit Groningen, The Netherlands)

4 December

Claudia Keller Valsecchi – Dosage compensation
(c.kellervalsecchiunibasch / Biozentrum, University of Basel)

11 December

TBA

18 December