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Basel Computational Biology Seminar Series - BC2

Current Research in Bioinformatics - Spring Semester 2022

Lectures take place on Mondays, starting at 16:15h, unless noted otherwise. Most lectures take place online via zoom, some from local speakers will take place at the Biozentrum (New building, room U1.197, level -1).

The zoom link is posted on ADAM (for registered students) and on the Biozentrum Intranet

Students who would like to obtain credits for this course, please register: 22830-01 Current Research in Bioinformatics I (fall semester), 21563-01 Current research in Bioinformatics II (spring semester)

Please check below schedule for upcoming lectures. The schedule will be updated regularly.

  

21.02.2022 | Igor Ulitsky, Weizmann Institute of Science

Igor Ulitsky
Weizmann Institute of Science
Rehovot, Israel

Unique features of transcription termination and initiation at closely spaced tandem human genes

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Date: Monday, February 21, 2022
Time: 16:15h
Location:  online, via zoom 
Contact: Dominik Burri  

 

14.03.2021 | Stanislaw Adaszewski, pRED, Hoffmann-La Roche 

pRED (Pharma Research and Early Development)
F. Hoffmann-La Roche AG
Basel, Switzerland

Antibody loop modelling on a quantum computer

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Date: Monday, March 14, 2022
Time: 16:15h 
Location:  online, via zoom 
Contact: Gabriel Studer

 

21.03.2022 | Mattia Pelizzola, IIT, Genova

Mattia Pelizzola
Dpt. Genomic Science
Istituto Italiano di Tecnologia
Genova, Italy

Dynamics of transcriptional regulation

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Date: Monday, March 21, 2022
Time: 16:15h 
Location:  online, via zoom 
Contact: Simone Faravelli

 

28.03.2022 | Judith Zaugg, EMBL Heidelberg

Judith Zaugg
Computational Structural Biology
EMBL
Heidelberg, Germany

Systems epigenetics view of cellular processes during ageing and infection

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Date: Monday, March 28, 2022
Time: 16:15h 
Location:  Biozentrum, U1.197 and livestream on zoom
Contact: Dominik Burri  

 

04.04.2022 | Joshua Weitz, Georgia Institute of Technology

Joshua Weitz
School of Biological Sciences
Georgia Institute of Technology
Atlanta GA, USA

Dynamic Models and Public-Facing Mitigation in Responding to COVID-19

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Date: Monday, April 4, 2022
Time: 16:15h 
Location:  online, via zoom
Contact: Marco Molari

 

11.04.2022 | Santiago Carmona, Uni Lausanne

Santiago Carmona
Department of oncology UNIL CHUV
Ludwig Institute for Cancer Research Lausanne
Université Lausanne
Lausanne, CH

Exploring immune cell states in cancer and infection; New methods for single-cell data science 

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Date: Monday, April 11, 2022
Time: 16:15h 
Location:  online, via zoom
Contact: Dominik Burri  

 

02.05.2022 | Clément Nizak, Sorbonne Université, Paris

Clément Nizak
Laboratoire Jean Perrin
Sorbonne Université
Paris, FR

Parameters and determinants of responses to selection in antibody libraries

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Date: Monday, May 2, 2022
Time: 16:15h 
Location: Biozentrum, U1.197 and livestream on zoom
Contact: Pierre Barrat-Charlaix

 

09.05.2022 | Robert C Brewster, University of Massachussetts

Robert C Brewster
Department in Systems Biology and Department of Microbiology and Physiological Systems
Chan Medical School
University of Massachussetts
Worcester MA, USA

Untangling the regulatory role of individual TFs in E. coli

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Date: Monday, May 9, 2022
Time: 16:15h 
Location:  online, via zoom 
Contact: Dany Chauvin

 

23.05.2022 | Arjun Raj, University of Pennsylvania

Arjun Raj
Department of Bioengineering & Department of Genetics
University of Pennsylvania
Philadelphia PA, USA

Emergent cellular ecosystems in melanoma revealed by single cell analysis

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Date: Monday, May 23, 2022
Time: 16:15h 
Location:  online, via zoom
Contact: Daan de Groot

 

30.05.2022 | Ivan Dokmanić, University of Basel

Ivan Dokmanić
Department of Mathematics and Computer Science
University of Basel

t.b.a.

Date: Monday, May 30, 2022
Time: 16:15h 
Location:  t.b.d.
Contact: Simone Faravelli

 

20.06.2022 | Jörn Dunkel, MIT

Jörn Dunkel 
Department of Mathematics
Massachusetts Institute of Technology
Cambridge, MA, USA

Learning biophysical models from live-imaging data

Date: Monday, June 20, 2022
Time: 16:15h 
Location:  Biozentrum, room U1.141
Contact: Knut Drescher